Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03187 ATGAAGTTTCTTTCATCACTTCTCAAGAGCAAAAGAATTAGGTCTTCTTTGCCATCTTGTCACCAACAACCTAGAACACTTTCTTTCAAAGCCTTAGCCAACAAAAACAACAATGACATGTTCAAAACTATTAATTCAGCCTTTGACATTATTGATGAAGATTTAAGCCCTGAATTATCCCTTTTCACTGATCAATCTTTTGAGTGTGCTACTAGCTTCTCTACATCTTCTGAGGATCATGATCCAATAGAGACATTGATCCATGAATTGTGTTCGGATAATGATGACAACAACAATAGGATTTTCTTTGAGCTTGATGAAACAAGTTCCATTTTTGAGGCTTCAAAGGGTCCATTATTCAAGGATAGTGTTGTTTTGTCCATGGATTCTAATGACCCTTTTGTTGATTTCAAGAAATCAATGGAGGAAATGGTTGAAGCTCTTGGATTGAAGGAGGATTGGGAGGGTCTTGAAGATCTCTTGTGTTGGTATTTGAAGGTTAATGAAAAATCCAATCATGGCTATATTGTTGGTGCTTTTGTTGATTTATTGGTAGGTCTTGAATTTTCTATTAATAATAATAATAAAAATAATAAGTCTTCTTCTTCTAATTCATATTTATCTCCTAATTTTCTTTCTTCTCCTTCTAATAATTTATCTTGTTATAGTACTTTTCAATCTTCTTCTTCTTGTAGCACTAGCACTACCCTTTATGCTTCTAATTCATTTATAGAAGGTGAAGGAGAGGGTCATCATAATCATAATAGCCTTGTTATTAGTGGCAGTTCTTCATTGTTGTTAGAGCAAGTTAAGGAAGAGATTATTCTTCAAGAAAATATTATTGATGAGGCTTCATCTTCCTCTACTAGAAATGCCTAA 879 0.3345 MKFLSSLLKSKRIRSSLPSCHQQPRTLSFKALANKNNNDMFKTINSAFDIIDEDLSPELSLFTDQSFECATSFSTSSEDHDPIETLIHELCSDNDDNNNRIFFELDETSSIFEASKGPLFKDSVVLSMDSNDPFVDFKKSMEEMVEALGLKEDWEGLEDLLCWYLKVNEKSNHGYIVGAFVDLLVGLEFSINNNNKNNKSSSSNSYLSPNFLSSPSNNLSCYSTFQSSSSCSTSTTLYASNSFIEGEGEGHHNHNSLVISGSSSLLLEQVKEEIILQENIIDEASSSSTRNA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03187 292 Coils Coil 267 287 - -
Aip02g03187 292 Pfam Transcriptional repressor, ovate 130 187 IPR006458 -
Aip02g03187 292 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 230 - -
Aip02g03187 292 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 230 IPR038933 GO:0045892
Aip02g03187 292 ProSiteProfiles OVATE domain profile. 126 186 IPR006458 -
Aip02g03187 292 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 125 187 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03187 Aip-Chr2 108707811 108708689 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip02g03187 Ovate 2.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03187 - - adu:110278105 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03187 02 108707811 108708689 Aip09g03597 09 142664720 142665796 ECH
Aip02g03187 02 108707811 108708689 Aip02g03187 02 108707811 108708689 ECH
Aip06g02092 06 92308444 92309494 Aip02g03187 02 108707811 108708689 PCT