Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03186 ATGGCTGCTAATTCCAGAAGAAAGCTTACTCTGAACAATGTTTCTGTGAAGCTTGGTTGTGGAAGCTGCAGAAGAAGAAAACCCAAACTTCTTCTTTACTTCCTCTTCAATCGAAAACCAAACAACCACCGTAACCATTCTTCTTCTTCTTATGACACAAGCACCACCACCACCACCACCACATTCTCTCCTTTCTACGACGACGACGACAACAACAACATGATGAAGACTCATCATCAGAAGAAGAAGAAGCAGCATTCCACTGTTAAGGGTTTCGGAAGAGTCGGAAGTGAAGGTAGCGTTGCTGTTGAGAAAGATTCAGAGGATCCTTTCTTGGATTTCAAGCATTCAATGCTCCAAATGATTCTTGAGAATGAGATTTATACTAAGCAAGATCTTAGCGAGCTTTTGAACTGTTTCCTTCAGCTGAATTCGCCTCATCACCATGCTGTTATTCTTAGAGCTTTCACTGACATCTGCAATGGCGTCTTCTCTAATTCACTTCAAACCTTTCATCATCATCATCACTTCAACCGTAAGTCACGTGACTTCTAG 555 0.418 MAANSRRKLTLNNVSVKLGCGSCRRRKPKLLLYFLFNRKPNNHRNHSSSSYDTSTTTTTTTFSPFYDDDDNNNMMKTHHQKKKKQHSTVKGFGRVGSEGSVAVEKDSEDPFLDFKHSMLQMILENEIYTKQDLSELLNCFLQLNSPHHHAVILRAFTDICNGVFSNSLQTFHHHHHFNRKSRDF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03186 184 PANTHER TRANSCRIPTION REPRESSOR OFP6 5 174 - -
Aip02g03186 184 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 5 174 IPR038933 GO:0045892
Aip02g03186 184 Pfam Transcriptional repressor, ovate 107 163 IPR006458 -
Aip02g03186 184 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Aip02g03186 184 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 101 161 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03186 Aip-Chr2 108631139 108631775 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip02g03186 Ovate 1.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03186 - - pvu:PHAVU_007G269800g 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03186 02 108631139 108631775 Aip02g03186 02 108631139 108631775 ECH