Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03169 ATGGAGGCTCTACGGCAGAGAGCCACGCTCGTCAAGGAATCGCTCCACAAGAGCCAGATCATCACCGACAACATGGTCTCCATCCTCGGCTCCTTCGACCACCGCCTCTCCGCCCTCGAAACCGCCATGCGTCCCACTCAGATTAAAACACATTCAATTCGAAGCGCACATGATAACATTGACAAGACTCTGAAGGCAGCAGAGGTGTTTTTGGTGCAATTCGAGCAAACTCGCAAGGCGGAGGCTAAAATACTCAGAGGGCCTCAAGAGGATCTAGAAAGCTATTTAGAAGCAGTTGATCAATTGAGAAACAATTTGAAATTCTTCAACAGCAAAAAGAGTTTCAAAGGCAGTGATGGTATCATCAACCATACCAACGGCTTGCTTGCCAAAGCTATCGCAAAGCTGGAAGAGGAGTTCAGACTTCTCTTAACAAATTACAGCAAACCGGTGGAACCTGACCGCCTATTTGACTGCATACCACACCGTCGGCGATCGTCAACTTCTGGAAGGCAAAGTGATGCAAGCAAACTCGATCTTGATAAGCAAAGCGAGTCTGAGAAGCAAACAGAACCGGCTGTTTACACACTTCCCACCCTGATTCCACCCAGAGTTATTCCTTTGCTACATGACTTAGCACAACAAATGGTCGAAGCTGGCCATCAACAACAGCTCTTTCGACTCTACAGAGACACTCGTGCCCCTGTCTTGGAACAGAGTCTTAGGAAGTTAGGTGTAGAGAGGCTGAGTAAAGATGATGTTCAAAAAATGCAGTGGGAGGTTTTGGAGTCTAAGATTGGGAACTGGACTCATTTCATGAGGATTGCTGTTAAATTGTTGCTGACTGTGGAAAAGCAAATATGTGATCAAATATTTGAAGGTTTTGAAAATATGAGAACTCAATGCTTTGCTGAAGTCACTGCTAGCAGTTTTGTTATGCTTCTTAGTTTCGGAGAGGCTGTTGCCAAAAGCAAGAGGTCATCTGAAAAACTATTTGTTACTCTAGACATGTATGAGACAATGAGAGAACTTCAACCTGAGCTTGAGACAATTTTTGAAGGTAAAGCCTGCACGGAATTGCGCGAAGCTTCTCTGTCCTTGACCAAGAGACTAGGTCAGACAGCCATGGAAACCTTCTGTGACTTTGAGGAACTTATTGAAAATGATGCTACTAAAACTGCTGTGCTTGATGGAACTGTCCATCCACTAACTAGCTATGTGATCAATTATGTTAAGTTTCTCTTTGATTATCAATCAACATTGAAACAAATTTTTCGCGAGTTTGATCCCAATGACCCAGAAGGTCAGTTAGCAAACCTGACAACAAGGATTATGCAGGCTCTCCAGAATAACCTGGATGGAAAATCAAAACAATATAAAGATCCAGCTTTAACCCAATTGTTCCTTATGAATAATATCCATTACATAGTGAGATCAGTGAGAAGGTCAGATGCAAAGGATATGTTGGGAGAGGACTGGGTGCAAATACATAGAAGAGTTGTGCAACAGCATGCAAATCAGTATAAAAGGATCTCATGGGCAAAGATTGCTCAGTGCCTCACTGTGCAATCATCAGGCGGGGCTGACAGCACCGCTGGAGTTTCAAGAAATATGATTAAAGATAGGTTCAAGAGTTTCAACTCTCAAATTGAGGAGCTTTATTGGAGGCAATCTCAATGGACTGTTCCTGACAGTGAGTTGCGTGAATCTCTCAAACTGGCTATAATCGAAGTACTTTTACCTGCTTATAGATCTTTCCTCAAACGTTTTGGGCCCATGCTTGAGAATGGGAAAAATCCTCAGAAGTACATAAGATACACACCCGAACAAATTGAAGAAATGTTGAATGGCTTTTTCGAGAGCAAGTCGTGGAATGATCAGAAGCGGTGA 1890 0.4323 MEALRQRATLVKESLHKSQIITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEVFLVQFEQTRKAEAKILRGPQEDLESYLEAVDQLRNNLKFFNSKKSFKGSDGIINHTNGLLAKAIAKLEEEFRLLLTNYSKPVEPDRLFDCIPHRRRSSTSGRQSDASKLDLDKQSESEKQTEPAVYTLPTLIPPRVIPLLHDLAQQMVEAGHQQQLFRLYRDTRAPVLEQSLRKLGVERLSKDDVQKMQWEVLESKIGNWTHFMRIAVKLLLTVEKQICDQIFEGFENMRTQCFAEVTASSFVMLLSFGEAVAKSKRSSEKLFVTLDMYETMRELQPELETIFEGKACTELREASLSLTKRLGQTAMETFCDFEELIENDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQIFREFDPNDPEGQLANLTTRIMQALQNNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSDAKDMLGEDWVQIHRRVVQQHANQYKRISWAKIAQCLTVQSSGGADSTAGVSRNMIKDRFKSFNSQIEELYWRQSQWTVPDSELRESLKLAIIEVLLPAYRSFLKRFGPMLENGKNPQKYIRYTPEQIEEMLNGFFESKSWNDQKR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03169 629 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 625 IPR004140 GO:0000145|GO:0006887
Aip02g03169 629 Gene3D Exocyst complex component Exo70 69 629 - -
Aip02g03169 629 MobiDBLite consensus disorder prediction 162 188 - -
Aip02g03169 629 Pfam Exo70 exocyst complex subunit 268 616 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip02g03169 629 MobiDBLite consensus disorder prediction 162 193 - -
Aip02g03169 629 Coils Coil 92 112 - -
Aip02g03169 629 SUPERFAMILY Cullin repeat-like 74 620 IPR016159 -
Aip02g03169 629 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 30 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03169 Aip-Chr2 108450268 108453863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03169 1 629 EXO70 exocyst subunit family AT5G52340 72.381 0.0 968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03169 K07195 - gmx:100779774 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03169 02 108450268 108453863 Aip02g03169 02 108450268 108453863 ECH