Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03168 ATGATCTTCAGCATGGAACAACAACAAAAACATGTTCTTTTGCTACTATTACTTTTGATGTTAACACTGTGCTGTGTTGTTCTCACTGAAACTGACCCTTCAGATGTAAAGGTTCTAAACCAGTTCAGAAACGGTCTCAAGAACCCTGAGCTCTTACCATGGCCTGAAAATGGTGGAGACCCATGTGGAAACCCTCCATGGAAGTACATCTTCTGCAATGGCAAAAGGGTATCTCAGATTCAAGCTAAAAACTTGAACTTGATTGGTCCTTTGCCTCAAAGCTTCAACCAGCTCACAATGCTTGAGAATCTTGGTCTTCAGAACAACAAGCTCAATGGCCCTTTACCTTCTTTCAGTGGTTTGAAGATGTTAAAGTTTGCATTTTTGAACCACAATGAGTTTGATTCAATCCCTTATGATTTCTTTGAAGGACTTGAGAGTCTTGAGGTTTTAGCATTGGATTACAATGTTAACTTCAATGCAAGCAATGGTGGTTGGAAATTCCCTTTGACTTTGCAAGGGTCAACACAATTGACCAATGTTTCTTGCATGAGTTGCAACATGGTTGGTCCAATTCCTGAGTTCTTGGGTAGCATGGTGTCTCTTTCTGTGCTGCAGCTTTCAGGGAATAACTTATCTGGCGCGATTCCGGCGAGTTTTAAAGGAATTGGGTTGCAGATTCTGTGGTTGAATAACCAAGATGGTGGTGGTCTTGATGGTACTATTGATGTGTTTGCAACAATGGTTTCTCTCACAAGTTTGTGGCTTCATGGTAACAATTTCAAAGGGACTATTCCTAAGAACATTGGTGACTTGGCTTCTCTGAAGGATCTTAATCTCAATGGTAACCAACTTGTTGGGGTAATTCCTGATTCTTTAGCTAAATTGCAATTGGAACATTTGGATTTGAACAATAACCATTTAATGGGTCCAACCCCAAAATTTGTAACACCTAAAGTTACTTTTGATTCCAATAATTTTTGTGAAACAAAACCTGGGGTTTCATGTTCCTATGAGGTTATGGCACTGATTGAGTTTCTTAGTGGGTTGGATTACCCTTTAAATCTTGTTAATTCATGGATTGGTGATAATCCTTGTGAAGGTCCATGGTTAGGAATAAAGTGCAATGCAAATGGGAAAGTTTCTATGATTATTTTGTCTAAGTTTAATTTCAGTGGTACTCTTAGTCCTTCTGTTGCGAAATTGGATTCTCTTGTTGAAATCAGATTAGGGGGTAACAAAATCAGTGGTGTGGTTCCTAGTAATTGGACTAGTTTGAGATCACTGAAATTGTTGGATCTAAGTGGCAACAACATTTCAGGTCCATTGCCAAGTTTTGATAAGAGTTTGAAGATTGTTACTGATGGGAATCCTCTGTTGATGAATCATAGTAACTCCTCACAAGCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCATCATCATCATCATCATCATCATCATCATCATCATCATCATCTGTTAATAAGCCAAATCCATCTTCTGGAAGGGGCGAACTTTCTTCGGTTGATACTCCAACAGCACCATCAAATTCCAACTCTGGCAGTTCTCTTGAATTGAAGAATCCCAAAAGAAAGAACTTGGTGTTGATTGTGACCCCAATTGTAGGTATTGTTGCTGCAATTATTCTGCTTATTCCAATTTATCTGTATTGTTTCAAAGGGAGAAATGAAGCCTCCAAGGGTTCAAGTTCATTAGTAGTTCACCCTAGAGATCCATCTGATTCAGACAATGTGGTAAAGGTTGTTGTTGCTAGCAATGGCAATGGAAGAAGCATTTCCACAGTTTCAGCAAGTGGTTCTGGGAACCTAAACACCAGTGGAAATGCAGTGTCTCATGTAATTGAAGCTGGAAATCTTGTAATATCGGTTCAAGTCCTTCGAGGCATTACCAAGAATTTCGCGCCTGAGAATGAGCTCGGCCGGGGTGGATTCGGGGGTGTTTACAAGGGAGAATTGGATGATGGGACTAAAATTGCAGTGAAGAGAATGGAGGCTGGTGTGATAAGCAGAAAAGCCTTAGATGAGTTCCAGTCTGAAATCGCAGTTCTTTCGAAAGTCCGGCACCGGAATTTGGTGTCTCTTTTGGGCTATTCAGTAGAAGGGACAGAGAGACTACTAGTCTATGAGTATATGCCACAAGGTGCTCTCAGTAAGCATCTTTTCCAATGGAAGAGCTTGCAATTGGAACCACTTTCGTGGAAGCGAAGGCTTAACATTGCATTGGATGTTGCTAGAGGAATGGAGTATCTTCATACTCTTGCTCACCAAAGCTTCATTCATAGAGATCTTAAGTCATCAAATATTTTGCTTGGTGATGACTTCAGAGCAAAGGTCTCAGATTTTGGACTTGTTAAGCTTGCTCCGGATGGCAAAAAATCTGTAGTGACTCGGCTTGCTGGAACATTCGGATACTTGGCACCAGAATATGCAGTGACCGGAAAAATCACTACAAAAGCAGATGTTTTCAGTTTTGGTGTTGTTCTGATGGAGCTACTGACCGGATTGACAGCACTCGATGAGGACCGGCCGGAGGAAAGCCAGTACTTGGCAGCATGGTTCTGGAATATAAAATCAGATAAGGAGAAACTTATGAATGCTATTGACCCTGCACTCGAAAAACAGGACGAAACCTTTGAGAGCATTTCCATCATTGCTGAGTTAGCTGGCCATTGCACTGCCAGGGAACCAAACCAGCGGCCGGATATGGGGTATGCCGTGAGCATTCTGGCACCGCTCGTTGAGAAATGGAAACCGATTGATGATGAAACTGAAGAGTATTGTGGCATAGACTATAGTTTACCCCTTAACCAAATGGTGAAGGGGTGGCAAGAGATGGAAGGAAAGGATTTAAGCCATGTGGACTTACAAGACAGCAAGAGTAGTATTCCGGCAAGGCCTACTGGATTCGCCGATTCTTTTACGTCCGCGGATGGCCGGTGA 2964 0.42 MIFSMEQQQKHVLLLLLLLMLTLCCVVLTETDPSDVKVLNQFRNGLKNPELLPWPENGGDPCGNPPWKYIFCNGKRVSQIQAKNLNLIGPLPQSFNQLTMLENLGLQNNKLNGPLPSFSGLKMLKFAFLNHNEFDSIPYDFFEGLESLEVLALDYNVNFNASNGGWKFPLTLQGSTQLTNVSCMSCNMVGPIPEFLGSMVSLSVLQLSGNNLSGAIPASFKGIGLQILWLNNQDGGGLDGTIDVFATMVSLTSLWLHGNNFKGTIPKNIGDLASLKDLNLNGNQLVGVIPDSLAKLQLEHLDLNNNHLMGPTPKFVTPKVTFDSNNFCETKPGVSCSYEVMALIEFLSGLDYPLNLVNSWIGDNPCEGPWLGIKCNANGKVSMIILSKFNFSGTLSPSVAKLDSLVEIRLGGNKISGVVPSNWTSLRSLKLLDLSGNNISGPLPSFDKSLKIVTDGNPLLMNHSNSSQAPSSSSSSSSSSSSSSSSSSSSSSSSVNKPNPSSGRGELSSVDTPTAPSNSNSGSSLELKNPKRKNLVLIVTPIVGIVAAIILLIPIYLYCFKGRNEASKGSSSLVVHPRDPSDSDNVVKVVVASNGNGRSISTVSASGSGNLNTSGNAVSHVIEAGNLVISVQVLRGITKNFAPENELGRGGFGGVYKGELDDGTKIAVKRMEAGVISRKALDEFQSEIAVLSKVRHRNLVSLLGYSVEGTERLLVYEYMPQGALSKHLFQWKSLQLEPLSWKRRLNIALDVARGMEYLHTLAHQSFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKKSVVTRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLTALDEDRPEESQYLAAWFWNIKSDKEKLMNAIDPALEKQDETFESISIIAELAGHCTAREPNQRPDMGYAVSILAPLVEKWKPIDDETEEYCGIDYSLPLNQMVKGWQEMEGKDLSHVDLQDSKSSIPARPTGFADSFTSADGR 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03168 987 Gene3D Transferase(Phosphotransferase) domain 1 719 936 - -
Aip02g03168 987 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Aip02g03168 987 Pfam Leucine rich repeat N-terminal domain 338 376 IPR013210 -
Aip02g03168 987 Gene3D Ribonuclease Inhibitor 32 335 IPR032675 -
Aip02g03168 987 CDD STKc_IRAK 647 920 - -
Aip02g03168 987 SUPERFAMILY Protein kinase-like (PK-like) 620 917 IPR011009 -
Aip02g03168 987 ProSitePatterns Protein kinases ATP-binding region signature. 647 669 IPR017441 GO:0005524
Aip02g03168 987 SUPERFAMILY L domain-like 338 450 - -
Aip02g03168 987 SMART serkin_6 641 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03168 987 SMART LRR_typ_2 272 295 IPR003591 -
Aip02g03168 987 SMART LRR_typ_2 248 271 IPR003591 -
Aip02g03168 987 SMART LRR_typ_2 402 425 IPR003591 -
Aip02g03168 987 SMART LRR_typ_2 121 144 IPR003591 -
Aip02g03168 987 SMART LRR_typ_2 426 448 IPR003591 -
Aip02g03168 987 SMART LRR_typ_2 199 222 IPR003591 -
Aip02g03168 987 ProSiteProfiles Protein kinase domain profile. 641 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03168 987 PANTHER OSJNBA0070M12.3 PROTEIN 8 987 - -
Aip02g03168 987 Gene3D Phosphorylase Kinase; domain 1 603 718 - -
Aip02g03168 987 MobiDBLite consensus disorder prediction 965 987 - -
Aip02g03168 987 SUPERFAMILY L domain-like 31 316 - -
Aip02g03168 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Aip02g03168 987 Pfam Protein tyrosine and serine/threonine kinase 644 914 IPR001245 GO:0004672|GO:0006468
Aip02g03168 987 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 8 987 - -
Aip02g03168 987 Pfam Leucine rich repeat 250 308 IPR001611 GO:0005515
Aip02g03168 987 MobiDBLite consensus disorder prediction 461 527 - -
Aip02g03168 987 Gene3D Ribonuclease Inhibitor 338 464 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03168 Aip-Chr2 108437436 108441160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03168 65 954 Receptor kinase-like Gene Family AT1G55610 28.480 7.75e-75 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aip02g03168 PK_Tyr_Ser-Thr 5.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03168 - - gmx:100781857 1372.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03168 02 108437436 108441160 Aip02g03168 02 108437436 108441160 ECH