Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03166 ATGCCGGGCTCGGTGTTCAGCCGGAAATGCAGGGAGGAGTGTGCGGCGGCGCTAGCGGAGTCGGCGTGGAATATGAGGGAGATTTCGAGGGTAAATGGTTCGTTGTTGAGGTTCATGAAGGAGGAGATACATGATGTTACTTCTCCTATGGTGTATTTGGCTATGTTGTTCAGCTGGTTCGCTTGGCATGTTGAGGACCATGACCTCCATAGCTTGAATTACCTTCACATGGGTTCTGGGAAGACCTGGTATGGCGTGCCGAAGATACAGTCGTGGCGTTCGAAGATGTTGTTAGGGTTCGTGGATATGGCTCTGAGATTAATCCTCTTGGTGAGTTTTCTTCACTTTTTGCAGGGGATAACAGAGTGTTTCTGTTTTTGGACTTTGGATTTCAATTTGCATTGTTACTATCCCCAACTCCCAAATTTTAGCTCCAAGTATGCAATTTGA 450 0.4711 MPGSVFSRKCREECAAALAESAWNMREISRVNGSLLRFMKEEIHDVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPKIQSWRSKMLLGFVDMALRLILLVSFLHFLQGITECFCFWTLDFNLHCYYPQLPNFSSKYAI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03166 149 Pfam JmjC domain, hydroxylase 50 91 IPR003347 -
Aip02g03166 149 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 1 88 - -
Aip02g03166 149 SMART cupin_9 17 140 IPR003347 -
Aip02g03166 149 SUPERFAMILY Clavaminate synthase-like 32 88 - -
Aip02g03166 149 Gene3D Cupin 1 98 - -
Aip02g03166 149 ProSiteProfiles JmjC domain profile. 17 149 IPR003347 -
Aip02g03166 149 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03166 Aip-Chr2 108367063 108367512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03166 18 87 C2H2 Transcription Factor Family AT5G04240 67.143 2.27e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aip02g03166 JmjC 5.8e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03166 - - ahf:114925382 183.726