Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03157 ATGCAGATAGTAATATCATCATTTGAGCAAGCAGCTGGGATTGGATCAGCAAGAACATACACTGCCCTTGCATTGCAAACAATCTCAAAGCAATTTAGGTGCTTGAAGGATGCCATAACTGGACAAATTAAAGCTGCAAATAAGAGCTTAGGTGAAGAGGACTACTTTGGTGGAGGCAAAATTGAAGGGTCAAGGCTTAAATATGTTGACCATCATCTAAGGCAACAGAGAGCTATACAACAACTGGGAATGATGCATCACAATGCTTGGAGACCCCAGAGAGGACTCCCGGAGAGATCGGTTTCCGTTCTACGCGCTTGGCTGTTCGAACATTTTCTTCATCCTTATCCCAAGGATTCAGACAAACACATGCTTGCAAAACAAACAGGGCTTACAAGGAGCCAGGTATCAAATTGGTTCATAAATGCAAGAGTTAGGCTTTGGAAACCAATGGTGGAGGAAATGTACTTAGAGGAAATGAAGGATCATGATATGAACAATAGTAACAACAACAATGTCTCTGAGGACAACAAATCAAGCAAGAGCAATGAAGATCCAAACAATGCTAAAAATTCGCCACCTCGAGACAGCAATTCTGAATCCGATACCAAAAAGAGCTTCAATTCGAAACAAGAAAACAACGTTTCAATTTCGACACCAACTTCGCAAATCGGCGGAAATTCAAGGAACAACAACAATAATAATAGTTCAGGATTCAGCTTCATGGGATCATCAGAATTATTAGATGGAATCACACAAGGTAGTAGTCCTAAGAAGCCAAGGAGCAATGAAATTGTTCATCATAGCCAAAACAATAATAATAATAATAATAACAACAATGAATACTCGTTCATCAATAATGTTGGGAACCAAACAAACTTCATTGGTGGATTTGGACAATACCCTATTGATGAAATTGCAAGATTTGATGCTGCTGCTGCTGAAAATTTTACAAGATTCTCAGGAAGAAGATTGGATCATATGAGTGGTGAACAACATTCAAATGAGTTTGGTGCAGTTAACAACACTCAAAATCCTCATCACTCTTCAGCTGCATTTCAGAGTATGCAGAATTCAAAGAGGTTTGCTGCACAATTGTTGCCAGATTATGTGGCCTAA 1119 0.3923 MQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIKAANKSLGEEDYFGGGKIEGSRLKYVDHHLRQQRAIQQLGMMHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKDHDMNNSNNNNVSEDNKSSKSNEDPNNAKNSPPRDSNSESDTKKSFNSKQENNVSISTPTSQIGGNSRNNNNNNSSGFSFMGSSELLDGITQGSSPKKPRSNEIVHHSQNNNNNNNNNNEYSFINNVGNQTNFIGGFGQYPIDEIARFDAAAAENFTRFSGRRLDHMSGEQHSNEFGAVNNTQNPHHSSAAFQSMQNSKRFAAQLLPDYVA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03157 372 CDD homeodomain 90 151 IPR001356 GO:0003677
Aip02g03157 372 ProSiteProfiles 'Homeobox' domain profile. 87 150 IPR001356 GO:0003677
Aip02g03157 372 MobiDBLite consensus disorder prediction 208 280 - -
Aip02g03157 372 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 1 282 - -
Aip02g03157 372 MobiDBLite consensus disorder prediction 161 280 - -
Aip02g03157 372 Pfam Homeobox KN domain 107 146 IPR008422 GO:0003677|GO:0006355
Aip02g03157 372 Gene3D - 85 164 - -
Aip02g03157 372 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 282 - -
Aip02g03157 372 SMART HOX_1 90 154 IPR001356 GO:0003677
Aip02g03157 372 Pfam Associated with HOX 1 40 IPR006563 -
Aip02g03157 372 SUPERFAMILY Homeodomain-like 91 157 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03157 Aip-Chr2 108227218 108229038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03157 1 372 Homeobox Transcription Factor Family AT2G35940 46.495 3.42e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aip02g03157 POX 3.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03157 - - gmx:100791773 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03157 02 108227218 108229038 Aip02g03157 02 108227218 108229038 ECH