Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03145 ATGAATGACTTGTTCTCCGGCTCCTTCTCCCGCTTCCGCAGCACCGATCAAGTCTCTCCGGACAACCAACACCATGTCATCGAGATGGGGGCGACCGACGGCAACGTCCACCTCGACAAGTTCTTCGAGGAAGTGGAGGTCGTAAAAGAGGAGCTGAAGGAGTTGGAGAAGCTCCATGAGAGCCTAAGAGTGTCCCACGAAAGGAGCAAGACCCTTCACAGCGCAGAGCCGTGA 234 0.5598 MNDLFSGSFSRFRSTDQVSPDNQHHVIEMGATDGNVHLDKFFEEVEVVKEELKELEKLHESLRVSHERSKTLHSAEP 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03145 77 PANTHER SYNTAXIN-121-LIKE 12 75 - -
Aip02g03145 77 PANTHER SYNTAXIN 12 75 IPR045242 -
Aip02g03145 77 Coils Coil 38 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03145 Aip-Chr2 108058629 108058862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03145 1 75 SNARE and Associated Proteins AT3G52400 46.914 5.70e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03145 K08486 - gmx:100793347 80.4925