Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03130 ATGGCTGCAAAGATAATGTTGCTTGAGGCTTCTGTGCTTCACCTGAAATTTTGCAATCTTCTGCAGAAGAGTTTTTCATTGAAAGAAATTGAGAAACAAGGGAGAACAACAATCATGGACACAATCCAAGAGATTGAAGAGAGGCATAACACAGTGATTAATATAGAGAGGAGTCTCAATAAGATTCATCAAGTGTTCTTGGACATGGCTGTTTTGGTCCAGCAGCTCCAGCTTGCAAGAATACCAGGAACAGGAAATGCACCTTCATTGCCATCATAA 279 0.4014 MAAKIMLLEASVLHLKFCNLLQKSFSLKEIEKQGRTTIMDTIQEIEERHNTVINIERSLNKIHQVFLDMAVLVQQLQLARIPGTGNAPSLPS 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03130 92 Pfam Syntaxin 24 74 IPR006011 GO:0016020
Aip02g03130 92 PANTHER SYNTAXIN 23 75 IPR045242 -
Aip02g03130 92 SUPERFAMILY t-snare proteins 31 75 IPR010989 GO:0016020|GO:0016192
Aip02g03130 92 Gene3D - 19 73 - -
Aip02g03130 92 PANTHER BNAC07G32850D PROTEIN 23 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03130 Aip-Chr2 107958235 107959259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03130 23 83 SNARE and Associated Proteins AT3G52400 58.730 5.95e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03130 K08486 - gmx:100793347 76.2553