Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03127 ATGCATGAATCGCGCCATTTCCAAGCGATACAACGGCTAAGAGGATGTGGTGGCCGGTTGAACACAAGAAACTCTGCTATCAACAATGGAAATGGCAAGGGTGGAAGTGAAGCAAACAAAAAAGGACTTGGCCATCAACTACATTCTAGTGGTTCTCAGAATTCTGAAGTCCTACAATCCTCGGCCGGAACCTTGAATTCGTTGAAGGAAATACGTGGAAGCAGTCCAAACATTTCATTAGAGGTGACAAGCATGTACTCATCCAGAGGAATTGATGAATTTGCCATCAATCATATTGGAACTCCTAGCACTCCTTTGCAGATAGGATGGACACTGGACATGGACATCGCATGA 354 0.4463 MHESRHFQAIQRLRGCGGRLNTRNSAINNGNGKGGSEANKKGLGHQLHSSGSQNSEVLQSSAGTLNSLKEIRGSSPNISLEVTSMYSSRGIDEFAINHIGTPSTPLQIGWTLDMDIA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03127 117 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 1 102 - -
Aip02g03127 117 MobiDBLite consensus disorder prediction 43 61 - -
Aip02g03127 117 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 1 102 IPR001289 GO:0003700|GO:0006355
Aip02g03127 117 MobiDBLite consensus disorder prediction 18 61 - -
Aip02g03127 117 MobiDBLite consensus disorder prediction 21 35 - -
Aip02g03127 117 ProSiteProfiles NF-YA/HAP2 family profile. 1 23 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03127 Aip-Chr2 107940997 107941350 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03127 1 66 CCAAT-HAP2 Transcription Factor Family AT3G05690 43.056 4.44e-07 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Aip02g03127 CBFB_NFYA 0.0004 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03127 K08064 - aip:107628020 137.887