Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03112 ATGCATCACTTGGCAGGTTGCCCCAATGTGATCTCCATTAAGGAATCCTATGAGGACGCTGTCGCGGTTCATGTTGTGATGGAGTTGTGTGCAGGGGGTGAACTCTTTGATAGGATTGTGGAAAGAGGGCATTACACAGAGAGAAAAGCAGCAAAACTAGCAAGGATTATAGTTGGTGTTATTGAGTCTTGCCACGCACTTGGAGTAATGCATCGCGACCTTAAGCCGGAGAACTTTCTTTTTGTCGATAAGCAGGAAGATTCAGTCCTTAAAGCAATAGATTTTGGCCTCTCTACTTTCTTCAAACCAGGAGACATTTTTGATGATGTGGTAGGAAGCCCTTATTATGTTGCACCTGAAGTTCTCCGAAAGCGTTACGGCCAAGAAGCTGATGTGTGGAGTGCTGGTGTCATCATATACATTCTCTTATGTGGTGTACCTCCATTTTGGGGAGAAACGGAGCAAGAGATTTTCGACTCAATTTTGAAGAGTAAACTGGATTTCTCATCAGCACCATGGCCTAGTATCTCTGATGGTGCAAAAGACTTGGTTAAGAAGATGCTTGACAGAGATCCTAGCAAACGAATATCCGCTTTTGAAGTTCTTAGACACCCCTGGATTCAGGTTGATGGAGCAGCTCCAGACAAGCCTCTTGATGCTGCAGTTTTGACTCGGCTGAAGCAGTTTACTGCAATGAACAAGCTCAAGAAAATGGCTCTTAGAGTAATTGCAGAGAATCTCAATGAAGATGAGATTGCTGGATTGAAAGAAATGTTTAAGAATATAGACACAGACAACAGTGGCCACATTACTTTTGAAGAACTAAAAATTGGACTGAAAAGATATGGTCATAATCTCAATGAGTCTGAAATTTATGACCTAATGCAAGCTGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCTTAGCAGCAACATTGCACTTAAACAAAATTGAGAAGGAAGATCATTTAGCTGCAGCTTTCTCATTTTTTGATAAAGATGGTAGTGGCTACATCACTCAAGATGAGCTTCAACAAGCTTGTGAAGAATTTGGAATAGAGGACGTTCGCTTGGAGGATTTGATCGGAGAAGTTGACCAGGATAATGATGGAAGAATAGACTACAATGAATTTGTGGCAATGATGCAAAAAGGCAATGCTGATATGGGTAGAAGGGGAAGAAAAGGTAGCAGTAGTTTTAGCATTGGATTTAGGGAACCACTACCTGTATGTTAA 1245 0.4137 MHHLAGCPNVISIKESYEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARIIVGVIESCHALGVMHRDLKPENFLFVDKQEDSVLKAIDFGLSTFFKPGDIFDDVVGSPYYVAPEVLRKRYGQEADVWSAGVIIYILLCGVPPFWGETEQEIFDSILKSKLDFSSAPWPSISDGAKDLVKKMLDRDPSKRISAFEVLRHPWIQVDGAAPDKPLDAAVLTRLKQFTAMNKLKKMALRVIAENLNEDEIAGLKEMFKNIDTDNSGHITFEELKIGLKRYGHNLNESEIYDLMQAADVDNSGTIDYGEFLAATLHLNKIEKEDHLAAAFSFFDKDGSGYITQDELQQACEEFGIEDVRLEDLIGEVDQDNDGRIDYNEFVAMMQKGNADMGRRGRKGSSSFSIGFREPLPVC 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03112 414 SUPERFAMILY Protein kinase-like (PK-like) 1 220 IPR011009 -
Aip02g03112 414 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 396 - -
Aip02g03112 414 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Aip02g03112 414 SUPERFAMILY EF-hand 236 387 IPR011992 -
Aip02g03112 414 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Aip02g03112 414 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 1 396 - -
Aip02g03112 414 Pfam Protein kinase domain 3 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03112 414 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Aip02g03112 414 Gene3D Transferase(Phosphotransferase) domain 1 35 231 - -
Aip02g03112 414 CDD STKc_CAMK 1 206 - -
Aip02g03112 414 CDD EFh 255 314 IPR002048 GO:0005509
Aip02g03112 414 CDD EFh 326 386 IPR002048 GO:0005509
Aip02g03112 414 ProSiteProfiles EF-hand calcium-binding domain profile. 286 321 IPR002048 GO:0005509
Aip02g03112 414 Pfam EF-hand domain pair 255 315 IPR002048 GO:0005509
Aip02g03112 414 Pfam EF-hand domain pair 325 386 IPR002048 GO:0005509
Aip02g03112 414 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Aip02g03112 414 Gene3D - 232 391 - -
Aip02g03112 414 ProSitePatterns EF-hand calcium-binding domain. 369 381 IPR018247 -
Aip02g03112 414 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Aip02g03112 414 Coils Coil 414 414 - -
Aip02g03112 414 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03112 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Aip02g03112 414 ProSiteProfiles EF-hand calcium-binding domain profile. 360 391 IPR002048 GO:0005509
Aip02g03112 414 SMART efh_1 290 318 IPR002048 GO:0005509
Aip02g03112 414 SMART efh_1 360 388 IPR002048 GO:0005509
Aip02g03112 414 SMART efh_1 326 354 IPR002048 GO:0005509
Aip02g03112 414 SMART efh_1 254 282 IPR002048 GO:0005509
Aip02g03112 414 ProSitePatterns EF-hand calcium-binding domain. 299 311 IPR018247 -
Aip02g03112 414 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03112 Aip-Chr2 107753865 107757136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03112 1 408 EF-hand Containing Proteins AT5G04870 77.451 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip02g03112 Pkinase 5e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03112 K13412 - gmx:100800415 716.842