Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03073 ATGTTGGAATCTCTAGCTTATTGCCAAAGCTTTAAGGGATATGACCTTACTAAGCAGAAGAGTCCAGGATGTTCTCATGTTCTTTCACGCATATGTAGAAGTTCTGTGTTCATGTTTTATTCAGTCAGCAAGCAAGTCACGCCGCAACCACGCTGTGCTAGTCATGGGATAGTTAACAGGAGTTCTTTCTCAGAAGGTTTCTTTAACAGCAAGCCTCTCTCTGTACCATTGTTTTCCGGAAGTAAGGGATTCTATTCATTTAAGTATAGTCCATCGCGTTGGCAAAGACTGCAGACAAATGTAGCATATGATGTTGCTGGTGCTGTTGAAGTCATCAACGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTGACTGTCTTAATTGTACCCACACTCAAATCAGTTAAAACCAGTCCTATACTTGGTTTCTTCTTTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAAATTTTGTCTGAATGGGGGATTCTTTTCTTGCTATTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTTAAAGCTCTTGCAAAATATGCCTTTGGGATGGGATTGGCTCAGGTTGTACTATGTACTTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGGGCTGTTGGAACGAAAATTTTGGAATTCCTTTTCCACTCAAGGCCTGATCTAGTGAACATCAGAAGCATTGATGAAGCTGTAGTGATTGGTGCTGCTCTTTCTTTATCATCATCTGCTTTTGTTCTTCAGCTCCTTGCTGAGAAAGGTGAGCTTCCCACAAGATTTGGTTCGGCAACTCTGGGAATACTTCTTTTGCAGGACTTAGCTGTTGTTCCTCTTTTAGTCATTCTTCCAATACTAGAGACCCAGAATATGTCTGAGGAAAGTCTTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTGGGTCTGCTTTCTCTTGGGGCAAAGTACATTCTCAGAAGAGTTTTCGAGGTTGTTGCCGATTCAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACCGTTGCTGGGATTTCACTAGGCACACAGAATTTGGGCTTCAGTGATACGCTTGGAGCATTTTTGGCTGGAGCAATCTTAGCTGAGACAAATTTCAGAACCCAGATTGAAGCAGATATAAGACCATTTAGAGGCTTGCTTCTTGGGTTATTTTTCGTAACTACGGGAACTTCAATTGACATGCAGCTCCTTTTTCGAGAGTGGCCAAATGTACTTTCACTGTTGGCAGGTTTAATTACTATCAAGACATTGATCATAACAGCGATTGGTCCTCGTGTTGGACTTACTTTACAAGAAAGTGTGAGAATAGGGTTGTTGCTCTCCCAAGGAGGCGAATTTGGATTTGTAGTTTTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCGCTTGAGCTTAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCATTAACCCCATTTCTGAATGAGGCTGGAAGAAGGGCTGCTAGTTTTATTGAAGAAAAATCTAATACTGAGAATAAAGCTTCTGAGAAGGTTAACTACAATGTCAGTGAACCTGTTGTTATCCTTGGATTTGGACAAATGGGTCAGGTCCTTGCAAATTTCCTGGGCAGTCCATTTGCTTCAGGAGTAGACAGTGTTTCAGTAGGATGGCCTTATGTGGTTTTTGATCTTAACCCGACAGTAGTAAAGGAAGCTCAAAAACTTGGTTTTCCTATTCTTTATGGAGACGGATCACGTCCAGCTGTTCTTCAATCTGCTGGTATCTCTTCTCCTAAAGCTATCATGATTATGTACACTGGCAAGAAGAGGACAATTGAAGCTGTTCAAAGGTTGCGATTGTCTTTTCCCGCGATTCCAATATATGCAAGAGCTCAAGATCTCAAGCATCTTTTAGATTTGAAGAAAGCTGGTGCAACAGATGCCATTATGGAAAATGCAGAGACTAGCTTACAGCTGGGTTCCAAGCTTCTAAAAGGCCTTGGTGTTATGTCTGATGATGTAGTATTCCTAAGCCAGCTTATTAGGGATTCCATGGAGCTACAAGCTCAAGAAGCAGTTGGTTTATCCGATCGAGACCTAGATATTATGAAACCGCTACAGGTGAGAGTTTCTGACTTGATGGAGGCAGGCGTACCAACAGCTTCACCGGAACACGAACCATCAGAAATGCACCTGAAAGATCAAGCTTCATTGGGTACAATTCAAGAGGAAGTGGTTGCTGAAGAACAAGATTATGAGCTAAGACAAGCTGTGAATTCACAAGGAAATGGTGCTCTAAATGGGAAACAAGGCACTGAAGATCAAATCTCAATGGTTGGTTCCAAAGATGCAATGGTGGACACATCATCAATCTCTTCCCATAATGCCATGGAGGAACCCTAA 2439 0.4186 MLESLAYCQSFKGYDLTKQKSPGCSHVLSRICRSSVFMFYSVSKQVTPQPRCASHGIVNRSSFSEGFFNSKPLSVPLFSGSKGFYSFKYSPSRWQRLQTNVAYDVAGAVEVINDLGLDTLTFLAVTVLIVPTLKSVKTSPILGFFFAGVVLNQFGLIRNLTDVKILSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLCTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILETQNMSEESLWPMLAQESLKALGGLGLLSLGAKYILRRVFEVVADSRSSEAFVALCLLTVAGISLGTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLFREWPNVLSLLAGLITIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEEKSNTENKASEKVNYNVSEPVVILGFGQMGQVLANFLGSPFASGVDSVSVGWPYVVFDLNPTVVKEAQKLGFPILYGDGSRPAVLQSAGISSPKAIMIMYTGKKRTIEAVQRLRLSFPAIPIYARAQDLKHLLDLKKAGATDAIMENAETSLQLGSKLLKGLGVMSDDVVFLSQLIRDSMELQAQEAVGLSDRDLDIMKPLQVRVSDLMEAGVPTASPEHEPSEMHLKDQASLGTIQEEVVAEEQDYELRQAVNSQGNGALNGKQGTEDQISMVGSKDAMVDTSSISSHNAMEEP 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03073 812 Gene3D - 114 514 IPR038770 -
Aip02g03073 812 Pfam Sodium/hydrogen exchanger family 121 506 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip02g03073 812 ProSiteProfiles RCK N-terminal domain profile. 537 669 IPR003148 GO:0006813
Aip02g03073 812 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 537 675 IPR036291 -
Aip02g03073 812 Pfam TrkA-N domain 538 662 IPR003148 GO:0006813
Aip02g03073 812 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 58 761 - -
Aip02g03073 812 Gene3D - 537 706 - -
Aip02g03073 812 MobiDBLite consensus disorder prediction 769 812 - -
Aip02g03073 812 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 58 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03073 Aip-Chr2 107331820 107339275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03073 1 787 Inorganic Solute Cotransporters AT4G04850 68.996 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03073 - - aprc:113858933 1220.3