Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03045 ATGGCTGACGATGAGGATTTCCAAGGTGCAGCAGGGATTTGCGGTGAGAACTGGTGGAGGAGTATTGATTCAACAAGGAGTGTGTTCCCTCCTCTAACCTCATCATCATCACCTTGTTCCGTGGCACCACCCACCGACACTAGAACTTGGCCAAGTAGTGATGATCATCATCATTGTTTCATGGATTTGAAGGCACCGGCGTGTGATATTATTAGTAACAATAATAATAATAATTACCATATGGGTTTTCATGATGCACAAGAGAAGCCACACAACAACAAGACTAGTACTAATGAATCACAAAGTGGAAGCATCTTGATCGATTCAACCTTCCAAATGATGGGTTTTGGCTTGTCTTCACCCAATTGGGATCATCAATCTCTGTTAGAGAATAATAATTGGAGCAGAAAGAACTTTGGAACCCAACAACAAGAAGTTTCAAGTACCATGGATGTTTTCAAGCGCATGAATAACCAAGAATTTTCCTCATCAACACTGATTCAAACATTATATGATCCACAGCGCTCATCATCATCATCATCACTTTTCACCAACCGTTCCATGTCCTATTCATCATCTTCTACAGTGAATTATCATCATGCCTCCGATGAAGTGTCACTGTCACCAATCACATGGCCTAAACTCTCTTCTTCTTCTTCTTCTTCATCTTCTTCTTTATCCCTACTTCCACCAATGGCAAAGCATCCTGACAATAACAATATTGGACTTCACTTTTCCAACAACAACAACACCCCTTTCTGGAACGCTTCCTCCGACGCTTTTCCTTTTGAAGAAGACAACAAACCCAATTCCCCCATTATTCTACTTAACAAGCTTAAGAGCGAAGAATTGTGTCTGGAGTCGGTAAAGAAAAATAATAATGTTTGCTCATCACCACCTCCATTCAAAAGGCCAAGAATTGAAACTCCACCCCCTTTACCAACTTTTAAGGTTCGGAAAGAGAAGTTAGGGGACCGAGTTACTGCTCTTCAGCAACTGGTTTCACCTTTCGGAAAGACCGACACTGCATCCGTTCTCCACGAAGCCATTGAGTACATCAAGTTTCTTCATGATCAAGTCAGCGTTTTGAGTACTCCATATATGAAGAGTGGAGCTTCCATTCAACCCAATCAGGAATGTAATGATTGGAAAGAGTCATCAGAAGGGGCAAAAGGAGATTTGAGAAGCCGAGGGCTATGTTTGGTACCAATTTCAAGCACATTCCCGGTTACTACGGAGGTGAGTGCTGATTTCTGGACGCCAACATTATCATTGGGAGGAGCACTTCTAAGATAG 1296 0.4205 MADDEDFQGAAGICGENWWRSIDSTRSVFPPLTSSSSPCSVAPPTDTRTWPSSDDHHHCFMDLKAPACDIISNNNNNNYHMGFHDAQEKPHNNKTSTNESQSGSILIDSTFQMMGFGLSSPNWDHQSLLENNNWSRKNFGTQQQEVSSTMDVFKRMNNQEFSSSTLIQTLYDPQRSSSSSSLFTNRSMSYSSSSTVNYHHASDEVSLSPITWPKLSSSSSSSSSSLSLLPPMAKHPDNNNIGLHFSNNNNTPFWNASSDAFPFEEDNKPNSPIILLNKLKSEELCLESVKKNNNVCSSPPPFKRPRIETPPPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKSGASIQPNQECNDWKESSEGAKGDLRSRGLCLVPISSTFPVTTEVSADFWTPTLSLGGALLR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03045 431 MobiDBLite consensus disorder prediction 31 49 - -
Aip02g03045 431 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 317 372 IPR036638 GO:0046983
Aip02g03045 431 PANTHER TRANSCRIPTION FACTOR BHLH103 48 413 - -
Aip02g03045 431 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 413 - -
Aip02g03045 431 MobiDBLite consensus disorder prediction 31 51 - -
Aip02g03045 431 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 307 356 IPR011598 GO:0046983
Aip02g03045 431 CDD bHLH_AtbHLH_like 313 364 IPR045239 -
Aip02g03045 431 Gene3D - 317 378 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03045 Aip-Chr2 107089463 107092138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03045 5 431 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 37.826 2.60e-59 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03045 - - ahf:112791361 777.319