Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03043 ATGACGATATTTTCTTCTAATAAACTCCTGCTTTTCACGATGATCCTTTTCATCCCTTGTTGCCACTCACTTCATACCATAACCATAACACCAAACCAACCCCTCAAAGACGGCCACGTTCTTGTCTCCGAAGACAAAGGAACCTTCGCACTCGGTTTCTTCAGCCCCGCAAATTCCACAAGCCGCTACCTTGCTATATGGTACAACAAAATCTCACAACAAACCGTTGTTTGGGTTGCCAACAGAGACACTCCCCTTAACCACACTTCAGCTGTTCTCTCCATCAACAACCATGGAAACCTCGTCCTCCACCACCAAAACACCACCCCAAACCTCAACCCTCTTTGGTCCTCCAACGTCACTCTCTCATCTACCAACACTTCAGCCAAGCTTCTCGACACTGGAAACTTGATTCTAATCCAAAGAGGAAGAAGCAGCAACAATAATAGCAATAGCGACGATTTTGTTGTGTGGCAGAGTTTTGATTATCCCGGCAACACACTCCTTCCCTTCATGAAACTCGGATTGGACCGGAAAACCACCTTGGACCGGTTCCTCACATCATGGAAGTCCCAAACCGACCCGGGATCCGGGAATTTCACTTTCAGGATCGACCCGACAGGGTTCGCCCAACTGTTCCTGTACAAGAACAAGACAGCTGTATGGCGGGTCGGGTCATGGACGGGTGAAAGGCTGACCGGAGTGCCCGAGATGACTCCGAACTTTATCTTCAACATTAGCTTTGTTAGCGACACAAAGGAAGTTAGCATAATGTACGGAGTGAAGGACCCCAACGTGCTCTCCAGGATGGTGCTGGACGAGACGGGTCACGTGAGGAGGATGACGTGGCAAGCTCACGAGCTAAGATGGTTCGAATTCTGGTACGCGCCCAAGGAGCAGTGTGATAACTACAGGCAGTGCGGCTCAAACACCAACTGTGACCCGTATGAGGAGGACAAGTTCATGTGCAAGTGCCTGCCGGGGTTCGAGCCCAGGTTCGAGAGAGAGTGGTACCTTAGAGATGGGTCAGGTGGGTGCGTGAGGAAGGCTAACGTGTCCACGTGTCGAAGCGGGGAGGGGTTTGTTGAAGTGGCGCGTGTGAAGGTGCCGGATACTTCGAAGGCGCGTGTAGATGCGGGATTGAGCATGAAGGATTGCAGGGTGAAGTGTTTGGGAGACTGCTCGTGTGCGGCGTATACGAGTGCCAACGAGACTACTCACACTGGCTGCGTTACGTGGCATGCTAACATGGAGGATACTAGGACCTACACACAAGTCGGCCAAAATTTGTTCGTACGTGTCGCTGCAATTGAATTAGCTCAATATGCGAAAAATCGCCATGGTTCTCTAGGCAAGAAGGGGATGCTAGCACTTTCAGGAGTTTCAGCTTTCTTATTCTTGTTTCTGGTGGTCATGTTGGGCTATTGCTTTCTGAAATCCAAGAAACAAGGGAGAAGAACGGATCGCAAGTATTCATTTCGTCTTAGTTTTGAGGACTCTACCAATCTACAAGAATTTGATAGTACGCAAAATTCAGATTTACCATTCTTTGATCTAAGCTCAATAGCTGCTGCAACAGATAATTTCTCCCCTGACAATAAACTTGGTCAAGGTGGATTTGGTTCTGTATATAAGGGGCTATTGAATAATGGAAAGGAAATTGCAGTGAAGAGATTGTCTAAAAATTCTGGACAGGGCATAGACGAGTTTAAAAATGAAGTTGTTTTGATTTCAAAGCTTCAACATCGAAATCTTGTGAGAATCTTAGGTTGTTGCATTCAAGGAGATGAGAAGATGCTAATATACGAATACTTGCCTAACAAAAGCTTAGATTCTTTTATTTTTGACGAATCTAAAAAGTCACAGTTAGATTGGAAGAAACGATTTCAAATTATATGTGGAATTGCTAGAGGAATGTTATATCTTCATCATGATTCACGACTAAGAATCATTCATAGAGATTTAAAGACTAGCAATGTCTTGTTAGATTCTGAATTGAATCCTAAAATTGCCGATTTTGGAATGGCAAGAATATTTGGCGGAAATCAAGTTGAAGCAAATACTAACCGTGTTGTTGGAACCTATGGATATATGTCACCGGAATATGCTATGGAAGGACAATTTTCAATTAAGTCTGATGTATATAGTTTTGGAGTTTTGCTCCTAGAAATCATTACGGGCAGAAAGAATAGTGGTCAATACGACGACATTACTACGACAAATTTAGTCGGCCATATATGGGATCTGTGGAAAGATGGGAGAGCCATGGAGATTGTTGATGAATGTTTATTGGAAGAGTCGTCATGTTGTGAGCATGAAGTCCAAAGATGCATACAAATTGGACTTTTGTGCGTTCAAGATTACCCCACAGACAGGCCATCAATGGCAGCAGTTGTTTCCATGATGGGAAATGACTCAGCCCTTCCTTCTCCAAAACATCCAGCATTTATTTTCAAGAGGGGCAAAAATTATGAGAGTTCAGATCCATCGACCAGTGACGGTGTTTATTCAGTCAACGACGTAAGTATGACCATCATTGAAGCTCGCTAA 2550 0.4467 MTIFSSNKLLLFTMILFIPCCHSLHTITITPNQPLKDGHVLVSEDKGTFALGFFSPANSTSRYLAIWYNKISQQTVVWVANRDTPLNHTSAVLSINNHGNLVLHHQNTTPNLNPLWSSNVTLSSTNTSAKLLDTGNLILIQRGRSSNNNSNSDDFVVWQSFDYPGNTLLPFMKLGLDRKTTLDRFLTSWKSQTDPGSGNFTFRIDPTGFAQLFLYKNKTAVWRVGSWTGERLTGVPEMTPNFIFNISFVSDTKEVSIMYGVKDPNVLSRMVLDETGHVRRMTWQAHELRWFEFWYAPKEQCDNYRQCGSNTNCDPYEEDKFMCKCLPGFEPRFEREWYLRDGSGGCVRKANVSTCRSGEGFVEVARVKVPDTSKARVDAGLSMKDCRVKCLGDCSCAAYTSANETTHTGCVTWHANMEDTRTYTQVGQNLFVRVAAIELAQYAKNRHGSLGKKGMLALSGVSAFLFLFLVVMLGYCFLKSKKQGRRTDRKYSFRLSFEDSTNLQEFDSTQNSDLPFFDLSSIAAATDNFSPDNKLGQGGFGSVYKGLLNNGKEIAVKRLSKNSGQGIDEFKNEVVLISKLQHRNLVRILGCCIQGDEKMLIYEYLPNKSLDSFIFDESKKSQLDWKKRFQIICGIARGMLYLHHDSRLRIIHRDLKTSNVLLDSELNPKIADFGMARIFGGNQVEANTNRVVGTYGYMSPEYAMEGQFSIKSDVYSFGVLLLEIITGRKNSGQYDDITTTNLVGHIWDLWKDGRAMEIVDECLLEESSCCEHEVQRCIQIGLLCVQDYPTDRPSMAAVVSMMGNDSALPSPKHPAFIFKRGKNYESSDPSTSDGVYSVNDVSMTIIEAR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03043 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 195 IPR036426 -
Aip02g03043 849 SMART ntp_6 356 434 IPR003609 -
Aip02g03043 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 43 844 - -
Aip02g03043 849 Pfam D-mannose binding lectin 75 190 IPR001480 -
Aip02g03043 849 Gene3D Transferase(Phosphotransferase) domain 1 605 809 - -
Aip02g03043 849 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 43 844 - -
Aip02g03043 849 Pfam PAN-like domain 355 419 IPR003609 -
Aip02g03043 849 Gene3D - 23 161 IPR036426 -
Aip02g03043 849 ProSiteProfiles Protein kinase domain profile. 529 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03043 849 Pfam Protein tyrosine and serine/threonine kinase 532 801 IPR001245 GO:0004672|GO:0006468
Aip02g03043 849 Gene3D Phosphorylase Kinase; domain 1 490 604 - -
Aip02g03043 849 Pfam S-locus glycoprotein domain 222 332 IPR000858 GO:0048544
Aip02g03043 849 PIRSF SRK 1 849 IPR024171 GO:0004674
Aip02g03043 849 SMART blect_4 32 164 IPR001480 -
Aip02g03043 849 CDD PAN_AP_plant 353 435 - -
Aip02g03043 849 SUPERFAMILY Protein kinase-like (PK-like) 510 801 IPR011009 -
Aip02g03043 849 Pfam Domain of unknown function (DUF3403) 804 849 IPR021820 GO:0004674
Aip02g03043 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Aip02g03043 849 CDD B_lectin 32 164 IPR001480 -
Aip02g03043 849 ProSiteProfiles Bulb-type lectin domain profile. 26 152 IPR001480 -
Aip02g03043 849 ProSiteProfiles PAN/Apple domain profile. 355 435 IPR003609 -
Aip02g03043 849 SMART serkin_6 529 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03043 849 ProSitePatterns Protein kinases ATP-binding region signature. 535 557 IPR017441 GO:0005524
Aip02g03043 849 CDD STKc_IRAK 535 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03043 Aip-Chr2 107056350 107059814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03043 469 849 Receptor kinase-like Gene Family AT4G23150 53.109 4.26e-131 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip02g03043 PK_Tyr_Ser-Thr 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03043 - - gmx:100812814 1306.58