Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03042 ATGAAGCAGAAACTCCATGTACTCTGCCTTATCATGGGTCAAAATCAAAAACCAAATTTACATTGCCATTATTGGCTGCTAAGTTCTTTGACATTAGTCCTTCTTAACATCTCATTTGGCTCTTGCTTTGACACCATATCCACTGACAAAGCCCTCAGAGATGGTGAGATTCTTGTTTCTAGGGACAAGACTTTTGCTATGGGATTCTTCAGCCCAGGCAGGTCCACTTCCCGTTACATCGGAATCTGGTACAACAATCTGCCACAACAAACTGTTATTTGGGTTGCAAACAGAAACACTCCCATCAATGACACATCTGGGGTTCTCTCAATCAACCAACATGGAAATCTAGCACTCCACCATAATCATAGCATTCTTCCAATTTGGTCTACCAATGTTTCAGTCACACCTTCAGACACAAACAAAGTTATAGCTCAACTCACAGACATAGCCAACCTTGTTCTGATCCTTAACGACACCAAAACTGTCATCTGGCAAAGCTTTGATCAACCAACAGATACTTTGATTCCCCACCTGAGATTAGGATTTGACAGAGGAAAAGACCAGAGCTGGGTCATCCAATCTTGGAAAACAGATGATGATCCTTCACCTGGTGACTTCACATTGAAGTTCAGCACCAATGGTATGCCACAGTTGTTTTTATACCACAAGAATCTTCCATGGTGGCGAGGAGGGCCGTGGAATGGTGAGTTTTTCATGGGTATACCCAACATGAAACGAGATAACAACATTTTCAATGTTTCTTGTGAGGAAGATGAGAACCATGCAGCACTCTCATATAACACCTATGACAAATCCGTTCCCAGTTGGGTGGTGGTTCAGCAATCTGGTTTCTTTCAAGTGTTCACTTGGGATAACCAGAAGAATCAGTGGAACCGGTACTGGTCAGAGCCTACTGGTCAATGTGATAACTATGGAACATGTGGACCTAACAGTAACTGTGACCCTTTGAACTATGAGGATTTTCAGTGCACTTGTTTGCCCGGGTTTGAACCGAAATTCCCGCGTAACTGGTATGAGAACAGAGATGGATCAGGAGGGTGTGCGAGGAAGAAAGGTGCATCTGTTTGTGGGAGTGGAGAAGGGTTTGTGAATATTGAAGGATTGAAGGTTCCTGATACATCTGTGGCTATAGTTAAGGAGGGTTTGAGTTTGGAGGAGTGTGAGAAGGAATGCTTGAGAAACTGTTCTTGCAGTGCTTATGCAGTTGCTAATGTGGCCAGTGGTGGAAGTGGATGCTTTGCATGGCATGGTGATTTGATGGACATAGAGAAGCTTAGTGATCAAGGCCAAGAAATATTTGTACGTGTTGATGCTGTTGAATTAGCTAATTATTACAAGAAAACAAAAGAAGCATTTGGTAAGAAGAAGATTGTAGGGGTTCTGGTAGCTTCTTTGTTTGCAGTTCTCCTTATTCTGGCCTGTGTATATCACTTGCGGTTGCAGAAGAAAAAGAAAGAAGATAAAATGTTGCGGCAATTGAATCAAGATTCTCCTAGAGAAAACAGTGATATTCAAAGTAAAGGAGATCCAAATCTCCCCTTCTTCAGCATTAAAATAATCATGGCAGCCACAAAAAATTTTTCTCCTGAGAATAAACTTGGACAAGGTGGATTTGGCTCTGTTTATAAGGGTCATCTATTTGATGGACAGGAGATAGCAGTAAAAAGACTCTCCAAAGATTCAGGTCAAGGAATAGAAGAGTTCATAAATGAAGTTAGGCTGCTAGTTAAACTCCAACACAGAAATCTTGTGAGGTTGCTCGGTTGTTGCCTTGAGAAGGAAGAAAGGATGCTAGTTTACGAATACCTTCCAAACAAAAGCCTAGACTTCCTTATATTTGATGAAGTTCGAAGATCATCGTTAGATTGGGGTCAACGCTTTAAAATTATTTCGGGAATTGCTCGAGGTGTATTGTATCTTCATCAAGATTCAAGATTGAAAATAATTCACAGAGATCTAAAAGCCAGCAATGTTCTTCTTGATGCTGTAATGAATCCCAAAATCTCAGACTTTGGAATGGCTAGAATATTTGGAGAAGAACAAATCCATGCAAGTACAAAAAAAGTAGTTGGAACCTATGGTTATATGTCACCTGAATATGCAATGGAAGGACGATACTCTACAAAATCAGATGTCTTCAGTTTCGGAGTCTTGTTATTGGAGATTATTGCTGGAAAAAGAAATACAAATTGTGAAAAAGGAAGAGCAGCCTCCTTAATTGGATATGTGTGGAAACTTTGGACTGAAGGAAGGGCCTTGGATGTTGTAGATTCAACACTAGGCCAATCTTATCCTCCTGAAATAGCACTGAGGTGCATTCAAATTGGACTCTTGTGTGTGCAAGAAAGCATCAACAATAGACCTTCCATGTTAGAAGTTGTTTTCATGCTATGCAATGAAGCACCTATTTGTTCACCTCAGAAGCCAGCATTTTTATTCAATGGCAACCTGGACATGAAAGATTCATCAACATCTGGAGGAGGATCTTCAGTAAATGAAGTGACAGTAACTACCATCTCTGCTAGATAA 2553 0.4066 MKQKLHVLCLIMGQNQKPNLHCHYWLLSSLTLVLLNISFGSCFDTISTDKALRDGEILVSRDKTFAMGFFSPGRSTSRYIGIWYNNLPQQTVIWVANRNTPINDTSGVLSINQHGNLALHHNHSILPIWSTNVSVTPSDTNKVIAQLTDIANLVLILNDTKTVIWQSFDQPTDTLIPHLRLGFDRGKDQSWVIQSWKTDDDPSPGDFTLKFSTNGMPQLFLYHKNLPWWRGGPWNGEFFMGIPNMKRDNNIFNVSCEEDENHAALSYNTYDKSVPSWVVVQQSGFFQVFTWDNQKNQWNRYWSEPTGQCDNYGTCGPNSNCDPLNYEDFQCTCLPGFEPKFPRNWYENRDGSGGCARKKGASVCGSGEGFVNIEGLKVPDTSVAIVKEGLSLEECEKECLRNCSCSAYAVANVASGGSGCFAWHGDLMDIEKLSDQGQEIFVRVDAVELANYYKKTKEAFGKKKIVGVLVASLFAVLLILACVYHLRLQKKKKEDKMLRQLNQDSPRENSDIQSKGDPNLPFFSIKIIMAATKNFSPENKLGQGGFGSVYKGHLFDGQEIAVKRLSKDSGQGIEEFINEVRLLVKLQHRNLVRLLGCCLEKEERMLVYEYLPNKSLDFLIFDEVRRSSLDWGQRFKIISGIARGVLYLHQDSRLKIIHRDLKASNVLLDAVMNPKISDFGMARIFGEEQIHASTKKVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGKRNTNCEKGRAASLIGYVWKLWTEGRALDVVDSTLGQSYPPEIALRCIQIGLLCVQESINNRPSMLEVVFMLCNEAPICSPQKPAFLFNGNLDMKDSSTSGGGSSVNEVTVTTISAR 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03042 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 92 202 IPR036426 -
Aip02g03042 850 ProSiteProfiles EGF-like domain profile. 305 343 IPR000742 -
Aip02g03042 850 SUPERFAMILY Protein kinase-like (PK-like) 518 817 IPR011009 -
Aip02g03042 850 SMART serkin_6 535 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03042 850 Gene3D Phosphorylase Kinase; domain 1 509 610 - -
Aip02g03042 850 Pfam D-mannose binding lectin 91 197 IPR001480 -
Aip02g03042 850 Gene3D - 40 168 IPR036426 -
Aip02g03042 850 Gene3D Transferase(Phosphotransferase) domain 1 611 812 - -
Aip02g03042 850 PANTHER - 27 847 - -
Aip02g03042 850 Pfam PAN-like domain 364 430 IPR003609 -
Aip02g03042 850 ProSiteProfiles Bulb-type lectin domain profile. 43 168 IPR001480 -
Aip02g03042 850 PANTHER GLYCOPROTEIN S13, PUTATIVE-RELATED 27 847 - -
Aip02g03042 850 ProSiteProfiles Protein kinase domain profile. 535 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03042 850 CDD PAN_AP_plant 364 444 - -
Aip02g03042 850 Pfam Protein tyrosine and serine/threonine kinase 538 802 IPR001245 GO:0004672|GO:0006468
Aip02g03042 850 PIRSF SRK 16 850 IPR024171 GO:0004674
Aip02g03042 850 ProSitePatterns Protein kinases ATP-binding region signature. 541 563 IPR017441 GO:0005524
Aip02g03042 850 SMART ntp_6 365 444 IPR003609 -
Aip02g03042 850 CDD STKc_IRAK 541 807 - -
Aip02g03042 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Aip02g03042 850 Pfam S-locus glycoprotein domain 229 341 IPR000858 GO:0048544
Aip02g03042 850 Gene3D Hepatocyte Growth Factor 362 443 - -
Aip02g03042 850 SMART blect_4 49 171 IPR001480 -
Aip02g03042 850 ProSiteProfiles PAN/Apple domain profile. 364 445 IPR003609 -
Aip02g03042 850 CDD B_lectin 52 171 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03042 Aip-Chr2 107039420 107048303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03042 475 850 Receptor kinase-like Gene Family AT3G45860 50.777 3.12e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip02g03042 PK_Tyr_Ser-Thr 7.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03042 - - aprc:113859914 1228