Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03041 ATGGGAAGAGGAAGAGGAAGAGGTGTCACTACTCTCCTCTGTTTCTTCCTTTTTTGCTTCTCCATTTTTTCCCCAAAACCTTGTATTTCTTCAGATACCTTAACAAAATCCCAAATCCTAAGAACAAACCAAACCCTCTTGTCCCCAAAGGGAATCTTCCAACTAGGTTTCTTTTCCCCCACCGATGATGATTCCACCTCCTTGTACCTCGCCATATGGTACAACAACATTCTTCCTAGAACAGTGGTTTGGGTTGCAAACAGAGACACCCCACTTCAGAGTTCCACAGGGTTTCTCCAAATAGCTGAAACAGGAACCATCAACATAGTTAACCATTCCTTGAAATCCATATGGTCTTCAAATCAAACCACACAACAACCTCAAAACCCAGTTCTCAAGCTCTTAGATTCAGGGAACCTTGTTCTAAGAGAATCAAACGAGAACGACGACCCACCAAAGTTTCTATGGCAGAGCTTCGATTACCCTACGGATACTCTGTTATCGGGAATGAAATTGGGTTGGAACTTAGACACAAACACGGAGAAGCACCTAACTTCATGGAAGTTCCAAGACCAAGACCCTTCAACCGGAGATTACTCTTTCAAGATGAACTTCCATGGCCTCCCTGAGATTTTCCTCTGGAACAAGGACAAGATAACATATAGAAGTGGACCATGGAACGGTGCGAGATTCAGCGGCGTGCCAGAGATGCAACCCGTAACGGATTCAATCAAATTCACGTTCCACGTTGATGAGCACCAAGTGTACTACACATTCTTCATCGGGAACGAATCGTTGTTCTCGAGACTGTTGGTGAGTTCTTCCGGAGAACTTCAGAGGCTGACTTGGATAGAGAGCACGCAGGCATGGAACAAATTCTGGTACGCACCCAAGGACCAATGCGATTATTACAGAGAGTGTGGGGCGTACGGCGTGTGCGACGCAAATGCATCGCCGGTTTGCCAGTGTGTGAAGGGGTTCAGACCGAAGAACCCGCAGGCATGGAACCTTCGGGATGGGTCGAATGGGTGTGTGAGGAAGACGGAATTGGAGTGTGAGAGTGACGGGTTCTTGAAGATGGGGAATGTGAAGCTGCCAGAGACGACGTCAGTGTTTGTGAATCGGAGCATGGGGATCATGGAATGCGGAGAAGTGTGCCGTCGGAACTGTTCATGTAGTGGTTATGCGAATATAGAGATCACCGGTGGGGGCAGCGGATGTGTCATGTGGATTGGCCCCCTCTTAGATATCAGGCGCTATCCTTCCGGTGGTCAGGATCTCTATGTCAGGTTAGCAGCTTCTGATTTGGCTGACACAGAATCTGGAGATGGTTCTCACAACACAGCTAAGGTTGTTGGCATTATAGTTGGCGGTGCAGCTCTTATACTTTTGGCACTGGCTATCTGTTTCTTGTTATGGAAGAAAAGGAAATTCCCATGCATGTTGGAGAGGGAGACAGTGCACAGAGGTTCTCTGGAAAGGAGTCAGGATTTGTTGATGACTGAAGTAGTCTTTTCAAGCAACAGAGAACAGTCTAGTGAAAGGAAAATTGATGACTTAGAGTTGCCATTGTTTGATTTTAATACCTTAACAATGGCTACAAAGAACTTCTCTGAAGAGAATAAACTTGGACAAGGAGGATTTGGTGTTGTTTACAAAGGCAGGTTGATGGAAGGCCAGGAAATCGCTGTGAAGAGGCTATCAAAAAATTCTGGTCAAGGAGTTGAAGAGTTTAAGAATGAGGTCAAACTGATTGTCAAACTTCAACACCGGAATCTTGTTCGGCTGCTTGGTTGCAGCATTCAAATGGATGAAAAGATGCTTGTGTATGAGTACTTGGAAAATAGAAGCCTTGATGGGATTTTATTTGACAAGGCAAAAAGCTCCTCATTGGATTGGCCAAGGCGCTTCAGCATTATTTGTGGTATTGCTAGAGGACTTCTTTATTTGCACCATGATTCCAGATTTAAGATTATCCATAGAGATCTCAAGGCAAGCAACATTCTACTTGACAAAGAAATGAATCCAAAAATATCAGATTTTGGGATGGCTAGAATTTTTAGCACAAATCAAACAGAAGCTAATACAATGAGAGTTGTTGGAACATATGGTTACATGTCTCCTGAATATGCTATGGATGGGATCTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGGGTATTAGTGTTGGAGATCATTACTGGAAAAAAGAATAGAGGATTCTACTATGCAAATGCTGAACTGAATCTTCTAGGGCATGCATGGAAGCAATGGAATGAAGGAAATGCATTGGAATTAATTGATTCGTCAATTGACAATTCATATTCATCATCTGAGGTTCTTAGATGCGTACAAGTGGGGCTCTTATGTGTGCAAGAGCGTGCAGAAGACAGGCCAACAATGTCTTCAGTGGTCTTGATGCTAAGTAGTGAAACTGCATCAATGCCGCAGCCCAAAAACCCTGGGTTTTGCCTGGGAAGGAATCCAATGGAAACTGATTCTTCTTCAAGTAAGCAAGATGAAACGTTCACTGTGAACCAAGTCACAGTCACAATGCTAAATGCCAGGTAG 2571 0.4391 MGRGRGRGVTTLLCFFLFCFSIFSPKPCISSDTLTKSQILRTNQTLLSPKGIFQLGFFSPTDDDSTSLYLAIWYNNILPRTVVWVANRDTPLQSSTGFLQIAETGTINIVNHSLKSIWSSNQTTQQPQNPVLKLLDSGNLVLRESNENDDPPKFLWQSFDYPTDTLLSGMKLGWNLDTNTEKHLTSWKFQDQDPSTGDYSFKMNFHGLPEIFLWNKDKITYRSGPWNGARFSGVPEMQPVTDSIKFTFHVDEHQVYYTFFIGNESLFSRLLVSSSGELQRLTWIESTQAWNKFWYAPKDQCDYYRECGAYGVCDANASPVCQCVKGFRPKNPQAWNLRDGSNGCVRKTELECESDGFLKMGNVKLPETTSVFVNRSMGIMECGEVCRRNCSCSGYANIEITGGGSGCVMWIGPLLDIRRYPSGGQDLYVRLAASDLADTESGDGSHNTAKVVGIIVGGAALILLALAICFLLWKKRKFPCMLERETVHRGSLERSQDLLMTEVVFSSNREQSSERKIDDLELPLFDFNTLTMATKNFSEENKLGQGGFGVVYKGRLMEGQEIAVKRLSKNSGQGVEEFKNEVKLIVKLQHRNLVRLLGCSIQMDEKMLVYEYLENRSLDGILFDKAKSSSLDWPRRFSIICGIARGLLYLHHDSRFKIIHRDLKASNILLDKEMNPKISDFGMARIFSTNQTEANTMRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIITGKKNRGFYYANAELNLLGHAWKQWNEGNALELIDSSIDNSYSSSEVLRCVQVGLLCVQERAEDRPTMSSVVLMLSSETASMPQPKNPGFCLGRNPMETDSSSSKQDETFTVNQVTVTMLNAR 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03041 856 PIRSF SRK 7 856 IPR024171 GO:0004674
Aip02g03041 856 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Aip02g03041 856 CDD STKc_IRAK 543 808 - -
Aip02g03041 856 ProSiteProfiles PAN/Apple domain profile. 352 432 IPR003609 -
Aip02g03041 856 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 855 - -
Aip02g03041 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Aip02g03041 856 Gene3D - 28 159 IPR036426 -
Aip02g03041 856 ProSiteProfiles Bulb-type lectin domain profile. 31 155 IPR001480 -
Aip02g03041 856 Gene3D Phosphorylase Kinase; domain 1 510 612 - -
Aip02g03041 856 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 228 IPR036426 -
Aip02g03041 856 Pfam S-locus glycoprotein domain 221 331 IPR000858 GO:0048544
Aip02g03041 856 CDD B_lectin 37 162 IPR001480 -
Aip02g03041 856 Gene3D Transferase(Phosphotransferase) domain 1 613 820 - -
Aip02g03041 856 Pfam Receptor serine/threonine kinase 493 527 IPR022126 GO:0004674
Aip02g03041 856 CDD PAN_AP_plant 348 432 - -
Aip02g03041 856 Pfam PAN-like domain 352 417 IPR003609 -
Aip02g03041 856 SMART ntp_6 352 431 IPR003609 -
Aip02g03041 856 PANTHER - 17 855 - -
Aip02g03041 856 Pfam Protein tyrosine and serine/threonine kinase 540 806 IPR001245 GO:0004672|GO:0006468
Aip02g03041 856 ProSiteProfiles Protein kinase domain profile. 537 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g03041 856 ProSitePatterns Protein kinases ATP-binding region signature. 543 565 IPR017441 GO:0005524
Aip02g03041 856 Pfam D-mannose binding lectin 81 188 IPR001480 -
Aip02g03041 856 Pfam Domain of unknown function (DUF3403) 810 856 IPR021820 GO:0004674
Aip02g03041 856 SUPERFAMILY Protein kinase-like (PK-like) 517 808 IPR011009 -
Aip02g03041 856 SMART blect_4 37 162 IPR001480 -
Aip02g03041 856 SMART serkin_6 537 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03041 Aip-Chr2 107031497 107038108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03041 525 856 Receptor kinase-like Gene Family AT4G11530 56.973 4.76e-130 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip02g03041 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03041 - - gmx:106799702 1316.98