Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03038 ATGACGTCACACCCACTCCATCCCACCTGCGACTTCGACACCGACTCCGTCGCCTCCTCCCCTCGCTCCGACCACTTCCACGACCCCCCTCAACGCGTCCGCTTCATGTGCAGCTTCGGCGGCAAGATCCTCCCTCGTCCTCACGACAACCAGCTCCGCTATGTCGGCGGTGACACCCGCATACTTGCCATCAACCGCTCCATCTCCTTCCCCGCCTTCCTCCTCAAGCTCTCCAAGCTATCAGGTATGACCAACATAACCGCCAAGTACCAGCTTCCCAACGAGGACCTTGACGCGCTAATTTCTGTCACCACCGACGAAGACGTCGAGAACATGATGGACGAGTACGACCGCGTCGCACACAATCAAAATCCCCGATCCGCTCGTCTCCGCCTCTTCCTCTTTCCGGAATCATCCGCCGCCGACGATACCTCCCGAGCCGGCAGCATCAGCTCCCTCCTCAACGGCTCCGTTAAACGCGAGAGCTGGTTCCTCGACGCCCTCAACGGCGGCGTCTCAGCCCTCGAGCGAGGCCGCTCCGAAGCTTCCTCCATGGTCTCGGAGGTTCCCGATTACCTCTTCGGGTTGGACAACTCCGAAGAAACGCAAAGCAACCGCGAATTACGACATAAGGACCGACCCTGTCTATATTCGGATCCGGGTTCTCCTGCCCCAGTTGCGTCTCAATTTTCCTCCACATCATCAGTGCCGTGCGTGCCATCTATCCCCAACCTTCCACCAGTTAAAACCAAACCGGCGAACCCGGCTCCTGAAGTGGAGTCCAAGGAGATTCAAATCGAAGCTGAACCGGCTCCACAACCTCAACCGCAACCAAACACGTACCCGGGTAACACTGTTCTGCACTACGCCGCGGATGCCTCCTATTCGGGCCATTCTGTTCAACCGGTTCCGGTTTACTATTTTCCCGGTCCGGTTCAACCAGGAACTCTTCCGGTTCATATGCAGGCTCCATATCCATACGTTCAACAACCGTATCATGCAGTGGTTCCGGGTCAGGTTCCAGTCGGGTACCGTCATTTTGTTCCGGGTTCGGGTCAAGTATATGGCGCGGGTCTGAGGCATGTAAGCCCGATGCACCATCCATACAGTACATCTGCCACAGCGGCTGTGGTTCAAGACGGTGTGAAACAGCAGATGTATCAGGCGGTGCCTGGTTCCGGTTACCCAGCAATGGCAATGACAGGTGGGGATGAACCACAGAGAGGTGGTTCGGAGTTTGTGGTGGGTCGGATCGGGTCGCCAACTCCCTAA 1272 0.5731 MTSHPLHPTCDFDTDSVASSPRSDHFHDPPQRVRFMCSFGGKILPRPHDNQLRYVGGDTRILAINRSISFPAFLLKLSKLSGMTNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAHNQNPRSARLRLFLFPESSAADDTSRAGSISSLLNGSVKRESWFLDALNGGVSALERGRSEASSMVSEVPDYLFGLDNSEETQSNRELRHKDRPCLYSDPGSPAPVASQFSSTSSVPCVPSIPNLPPVKTKPANPAPEVESKEIQIEAEPAPQPQPQPNTYPGNTVLHYAADASYSGHSVQPVPVYYFPGPVQPGTLPVHMQAPYPYVQQPYHAVVPGQVPVGYRHFVPGSGQVYGAGLRHVSPMHHPYSTSATAAVVQDGVKQQMYQAVPGSGYPAMAMTGGDEPQRGGSEFVVGRIGSPTP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03038 423 MobiDBLite consensus disorder prediction 202 216 - -
Aip02g03038 423 SMART PB1_new 47 137 IPR000270 GO:0005515
Aip02g03038 423 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 417 - -
Aip02g03038 423 MobiDBLite consensus disorder prediction 243 262 - -
Aip02g03038 423 Gene3D - 53 136 - -
Aip02g03038 423 SUPERFAMILY CAD & PB1 domains 48 140 - -
Aip02g03038 423 MobiDBLite consensus disorder prediction 201 230 - -
Aip02g03038 423 MobiDBLite consensus disorder prediction 1 17 - -
Aip02g03038 423 Pfam PB1 domain 48 136 IPR000270 GO:0005515
Aip02g03038 423 MobiDBLite consensus disorder prediction 404 423 - -
Aip02g03038 423 CDD PB1_UP2 36 135 - -
Aip02g03038 423 MobiDBLite consensus disorder prediction 1 29 - -
Aip02g03038 423 PANTHER OS05G0427100 PROTEIN-RELATED 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03038 Aip-Chr2 106996021 106997815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03038 22 145 MAP Kinase Kinase Kinase AT3G46920 45.161 1.72e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03038 - - aprc:113858359 602.823