Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03035 ATGGGAAGAACACCTTGCTGTGAGAAGAATGGGCTGAAGAAGGGGCCATGGACGCCAGAGGAGGATCAGAAGCTCGTTGATTACATTCACAAACATGGCTACGGCAATTGGAGAACGCTCCCTAAGAATGCCGGTATGTATATATACTTGCACACTTTGTTAAATCTGTTTTTTAATTTGTTGACTTATACATATATAGGGTTGCAAAGATGCGGAAAGAGTTGCCGTCTGCGGTGGACAAACTATCTCCGGCCAGATATAAAGCGCGGTCGATTCTCCTTGGAAGAGGAGGAGACCATAATACACCTTCACAGCATTCTTGGAAACAAGTGGTCTGCAATAGCGTCGCGGCTGCCAGGGAGGACAGACAACGAAATAAAGAATTATTGGAATACACACATTAGGAAGAGGCTACTGAGGATGGGAATCGATCCTGTGACACACAGTCCACGCCTAGACCTTCTTGATCTCTCATCTCTCTTTGGTTCATCAATATCACACATCAACAATAACATGCAACACCATCTTAACCCTGAGCTTCTCAAATTGGCCACGTCACTCTTCTCTCATACTAATTCTCTTGACAACAGCCACAACCAAATCATCAGTAGTGATGTTTCCTTGTCTTTCCCTCAAGCAAACTTTCTAGAATCCAATAATAATGTGGACTCAGCATACCCATCAAATCTAATGAATACTAGTGATTATTGGCACGCCGATAATAATAATATTGGAATTGCTTCAACTTCTAGCCCTTGTTATGTGACTGACCAATTACCAACAAGTTATTATTATAACAATAATAGTAACAACTACTACTGTCATCATGCAAGTCTTGTGGACCCACCTATGTCTGAAACGTCAACCTTCCATTCCAATAATAGCAGCAGTAATACTTATGTCAATGGAAACAACAGTAGCACCGAGGATGAGAGAGAAAGCTATGTCAGCACCAATAACAGCGTCTTGAGATTTGAAATCCCAGATATGTTGGATGTCAATGCATTCGTGTAA 1014 0.4172 MGRTPCCEKNGLKKGPWTPEEDQKLVDYIHKHGYGNWRTLPKNAGMYIYLHTLLNLFFNLLTYTYIGLQRCGKSCRLRWTNYLRPDIKRGRFSLEEEETIIHLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSLFGSSISHINNNMQHHLNPELLKLATSLFSHTNSLDNSHNQIISSDVSLSFPQANFLESNNNVDSAYPSNLMNTSDYWHADNNNIGIASTSSPCYVTDQLPTSYYYNNNSNNYYCHHASLVDPPMSETSTFHSNNSSSNTYVNGNNSSTEDERESYVSTNNSVLRFEIPDMLDVNAFV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03035 337 Pfam Myb-like DNA-binding domain 89 133 IPR001005 -
Aip02g03035 337 Pfam Myb-like DNA-binding domain 14 83 IPR001005 -
Aip02g03035 337 ProSiteProfiles Myb-like domain profile. 84 134 IPR001005 -
Aip02g03035 337 CDD SANT 16 83 IPR001005 -
Aip02g03035 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 138 IPR017930 -
Aip02g03035 337 SUPERFAMILY Homeodomain-like 11 130 IPR009057 -
Aip02g03035 337 MobiDBLite consensus disorder prediction 286 312 - -
Aip02g03035 337 SMART sant 88 136 IPR001005 -
Aip02g03035 337 SMART sant 13 85 IPR001005 -
Aip02g03035 337 Gene3D - 11 89 - -
Aip02g03035 337 CDD SANT 91 134 IPR001005 -
Aip02g03035 337 PANTHER TRANSCRIPTION FACTOR MYB41 65 332 - -
Aip02g03035 337 PANTHER TRANSCRIPTION FACTOR MYB41 1 46 - -
Aip02g03035 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 83 IPR017930 -
Aip02g03035 337 ProSiteProfiles Myb-like domain profile. 9 83 IPR001005 -
Aip02g03035 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 65 332 - -
Aip02g03035 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 46 - -
Aip02g03035 337 Gene3D - 91 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03035 Aip-Chr2 106951653 106952956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03035 1 337 MYB Transcription Factor Family AT4G21440 49.735 1.98e-104 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aip02g03035 Myb_DNA-binding 1.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03035 K09422 - zju:107421995 321.627