Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03029 ATGGGTAACGAAGAAGACTTCGCCGGAGAACCCAACTCCTTTAGGAAGGAGGCACCCGCCGGAACTTCCAACCTCCTCCGGCGAGCAGCGGAGCTCATTGCCACCGTGCTCTCCCTCTCCCTCTCGATCAGGGCCTTCGCCACCAAATGGCAACTCATCCGGACCAAGCTCGAGGAGCTCCACTCCGGCCTAATCGCCGCCGAGAACTGCGACTCCGGCGAGAACCCACAGCTCACGGGCATCCTCCCATCGGTGATTTCGACCGCCGGAGAGTGCCGCGACTTGGCGCGCCGTTGCTCCGACCTCTCCTACAGCGGGAAGCTCCTTATGCAGAGCGATTTGGACGTGGCGATTGCAAAGCTCGACGGCCACGTCAGCACCCTCTCGGAGATTTACAAAAAAGGAATATTGGCGAATGGGTCTGCCCTCGTCGTTTCAAAACCGAGTCTTGGCGCTTCAAGAGAAGACATAAGGTTCTACGTGAGGGACCTATTAACGAGGATGAAGATTGGGGATTTGGGTATGAAGAAAGTGGCTCTCAGGAACCTGTACGAGGTTGTCGTCGAGGATGACAGGTACGTTAAGGCCGTTGTGGACGTTGGTGACGTGGTTCATGTGCTGGTTGGGTTTCTTGGTTCAACTGAATCGGGACTCCAAGAGGAGAGTGCAAAGGTTGTTTCTGTGATTACAGGATTTGGTTGCTACAAGGGCAATTTGGTAAATTCAGGAGTGGTTGCGCCGTTGGTTAGGGTGCTGGATTGTGGGAGCGAAGAAGGGAAAGTTGCTGCAGCGAGGTGTTTGGTGAAGCTCACTGAGAATTCTGATAACGCTTGGTGTGTTTCTGCACATGGTGGTGTCACTGCGTTGCTTAGAATTTGTGATGGTGATGGTGGTGGTTGTGACGGAGATTTGATTGGTCATGCGTGCGGTGTGTTAAGCAATCTTGTTAGTGTTGAAGAGATTAAGAGGTTTATGATTGAGGAAGGTGCGGTTTCTACGTTTATAAGGCTTGTGAGGTCCAGGGATGAAGCCATTCAAGTGAATTCAATAGGCTTCATTCAGAACATTGCCTCTGGTGATGAATTGGTTAAGCAGATGGTGATTAGAGAAGGTGGAATCCGTGCTCTGTTGCGTGTTCTTGATCCTAAATGGCCCTGTTCTTACAAAACAAGGGAGATTTCAATAAGGGCTATTGAGAATTTGTTTTTCTCTCCGCTTAGCTCTGTGAGTGCTTTGATTAGTTACGGTTTTGTGGATAGTTTGCTGTATTATGTTCGAAATGGCGAGGTTTCGATTCAAGAATTGGCGCTGAAAGTGGCATTTCGATTGTCTGGAACGTCCGAGGAGGCGAAGAAATCAATGGGGGATGCAGGTTTCATGGCTGAGCTTGTGAAATTCCTGAATGCGAAATCGTTTGAGGTTCGCGAAATGGCAGCTGAGGCACTCTCTGGGTTGGTTATGTTGCCTAAGAACAGAAAGAGGTTTGTGCAGGATGACCATAACATTGCACTTATCCTTCAATTGCTTGATCCTGAAGAGGGGAATTCAGGTAACAAAAAGCACTTAATCTCAATCTTAATGTCATTGACAAGTTGCAATAGTGGGAGGAAAAAGATTGTTAGTTCTGGTTATGCAAAGAACATTGAGAAGCTTGCAGATGCTCAAGTTTCTTCTGATGCCAAGAAACTTGCAAAGAAGCTATCCACAAACAGGTTCCGCAGCTTGTTCAGTGGAATCTGGCATTCATGA 1749 0.4866 MGNEEDFAGEPNSFRKEAPAGTSNLLRRAAELIATVLSLSLSIRAFATKWQLIRTKLEELHSGLIAAENCDSGENPQLTGILPSVISTAGECRDLARRCSDLSYSGKLLMQSDLDVAIAKLDGHVSTLSEIYKKGILANGSALVVSKPSLGASREDIRFYVRDLLTRMKIGDLGMKKVALRNLYEVVVEDDRYVKAVVDVGDVVHVLVGFLGSTESGLQEESAKVVSVITGFGCYKGNLVNSGVVAPLVRVLDCGSEEGKVAAARCLVKLTENSDNAWCVSAHGGVTALLRICDGDGGGCDGDLIGHACGVLSNLVSVEEIKRFMIEEGAVSTFIRLVRSRDEAIQVNSIGFIQNIASGDELVKQMVIREGGIRALLRVLDPKWPCSYKTREISIRAIENLFFSPLSSVSALISYGFVDSLLYYVRNGEVSIQELALKVAFRLSGTSEEAKKSMGDAGFMAELVKFLNAKSFEVREMAAEALSGLVMLPKNRKRFVQDDHNIALILQLLDPEEGNSGNKKHLISILMSLTSCNSGRKKIVSSGYAKNIEKLADAQVSSDAKKLAKKLSTNRFRSLFSGIWHS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03029 582 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 329 372 IPR000225 GO:0005515
Aip02g03029 582 Pfam Armadillo/beta-catenin-like repeat 320 358 IPR000225 GO:0005515
Aip02g03029 582 Gene3D - 160 571 IPR011989 -
Aip02g03029 582 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 582 - -
Aip02g03029 582 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 582 - -
Aip02g03029 582 SMART arm_5 190 231 IPR000225 GO:0005515
Aip02g03029 582 SMART arm_5 360 403 IPR000225 GO:0005515
Aip02g03029 582 SMART arm_5 273 317 IPR000225 GO:0005515
Aip02g03029 582 SMART arm_5 318 358 IPR000225 GO:0005515
Aip02g03029 582 SMART arm_5 232 272 IPR000225 GO:0005515
Aip02g03029 582 SMART arm_5 447 487 IPR000225 GO:0005515
Aip02g03029 582 SUPERFAMILY ARM repeat 162 566 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03029 Aip-Chr2 106887856 106890221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03029 144 381 U-box Gene Family AT2G23140 26.721 5.59e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03029 - - adu:107480628 1086.63