Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g03027 ATGCGCACTTTCACTTTCTTCCAGCGTCTTTCTAAAGCTTTCCATGGCTACGACTCCCACTTCAAGCTTGTACTCCTCTGCACCACCGTTAGCGGTGGTGGACTTTTGGCATACGGCGAGGCGGTAGCTCAATCGGAAGCGGCGGTAGTGAAGGAGGAGAAGAAGAAGGTGGTGGTGCTGGGGACAGGTTGGGCAGGGACGAGCTTCTTGAAGAATCTGGAGAATCCCAGATATGAGGTCCACGTGGTGTCTCCTCGCAACTATTTTGCCTTCACGCCTTTGCTTCCTAGTGTCACGTGCGGCACCGTCGAGGCCCGTAGCATCGTTGAACCCGTTCGCAACATCTTTAGGAAGAAAAATGTGAAAGTAGACTTCAGTGAAGCAGAATGTCTCAAGATTGACGCAGCAAACAGGAAAGTTTACTGTCGATCAAGTATAAGCAATAATTCGAATGAAAAAGATGAATTTGTTGTGGACTATGACTTCCTGATCATAGCCGTGGGAGCAAATGTAAACACATTCAATACTCCCGGGGTGGTGGAGAATTGCCATTTCTTGAAGGAAGTTGAAGATGCACAGAAGATCAGAAGAACAGTTATTGACTGCTTTGAGAGGGCAAGCTTGCCTAGTGTAAGTGAGGAAGAGAAGAAGAGAATCCTTCATTTTGCTATTGTCGGAGGTGGTCCGACCGGGGTGGAGTTTGCAGCCTCTCTTCATGACTTCGTCAATGAAGACTTGGTTAAATTATATCCCGGTATAAAAGATTTGGTTAAGATTACGCTTCTGGAGGCAGGGGAACATATTTTGAGCATGTTTGACAAAAGAATCACTTCTTTTGCTGAGGACAAGTTCCGAAGAGATGGCATCGATGTGAAAACTGGATCCATGGTTGTGAAGGTATCTGATAAAGAAATTTCGACTAAAGAAATGAAAAATGGAGGAGAAATCACTACAATGCCATATGGAATGGCTGTCTGGTCAACTGGCATTGGGACTCGTCCATTTATTAGAGATTTTATGACACAAATTGGCCAGATTAACAGGCGTGCTGTTGCTACCGATGAATGGTTGAGAGTTGAGGGAACCAACAATGTGTATGCACTTGGAGATTGTGCTACAATAAACCAGCGAAAAGTCATGGAAGATATTGCGGCAATCTTTAAGAAGGCGGACAAAGACAACTCAGGAACCCTCACGGTCAAAGAATTTCAAGAGGTATTGGATGATATCTGTGAGAGATACCCTCAGGTAGAACTGTATCTGAAGACTAGACAAATGAATGATATTGCTGATCTGTTGAAAGAAGCCAAGGGAGATGTTGCAAAGGAATCTATTGAGCTGAGTATCGAAGAACTAAAAACTGCACTTTCTAAAGTGGATTCTCAAATGAAGTTTCTTCCTGCTACAGCACAGGTTGCATCTCAGCAAGGCACCTACCTTGCCAAGTGCTTTAATCGGATGGAAGAGTGTGAAAAGAATCCAGAGGGTCCTATCAGGTTCAGGGGAGAAGGACGCCATAGGTTCAAACCCTTCAGGTACAAGCATTTAGGTCAATTTGCTCCTCTGGGAGGAGAGCAGGCAGCTGCACAGCTTCCTGGTGATTGGGTTTCAATTGGTCATAGCACTCAATGGCTTTGGTATTCTGTCTATGCAAGCAAGCAAGTTAGCTGGCGCACACGGGCATTAGTTGTATCAGACTGGACAAGGCGTTTTATTTTTGGAAGGGACTCAAGTCAAATCTGA 1743 0.4498 MRTFTFFQRLSKAFHGYDSHFKLVLLCTTVSGGGLLAYGEAVAQSEAAVVKEEKKKVVVLGTGWAGTSFLKNLENPRYEVHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFRKKNVKVDFSEAECLKIDAANRKVYCRSSISNNSNEKDEFVVDYDFLIIAVGANVNTFNTPGVVENCHFLKEVEDAQKIRRTVIDCFERASLPSVSEEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVKLYPGIKDLVKITLLEAGEHILSMFDKRITSFAEDKFRRDGIDVKTGSMVVKVSDKEISTKEMKNGGEITTMPYGMAVWSTGIGTRPFIRDFMTQIGQINRRAVATDEWLRVEGTNNVYALGDCATINQRKVMEDIAAIFKKADKDNSGTLTVKEFQEVLDDICERYPQVELYLKTRQMNDIADLLKEAKGDVAKESIELSIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGEQAAAQLPGDWVSIGHSTQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g03027 580 SUPERFAMILY EF-hand 371 467 IPR011992 -
Aip02g03027 580 SUPERFAMILY FAD/NAD(P)-binding domain 216 375 IPR036188 -
Aip02g03027 580 SMART efh_1 382 410 IPR002048 GO:0005509
Aip02g03027 580 Gene3D - 46 414 - -
Aip02g03027 580 Gene3D - 422 579 - -
Aip02g03027 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Aip02g03027 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Aip02g03027 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Aip02g03027 580 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Aip02g03027 580 PANTHER NAD(P)H DEHYDROGENASE B2 3 580 - -
Aip02g03027 580 PANTHER NADH DEHYDROGENASE 3 580 IPR045024 GO:0003954|GO:0006116
Aip02g03027 580 SUPERFAMILY FAD/NAD(P)-binding domain 54 273 IPR036188 -
Aip02g03027 580 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Aip02g03027 580 Pfam Pyridine nucleotide-disulphide oxidoreductase 55 380 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g03027 Aip-Chr2 106845704 106851174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g03027 1 580 Chloroplast and Mitochondria Gene Families AT4G21490 73.928 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g03027 K03885 - gmx:100809915 1050.43