LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip02g03027	ATGCGCACTTTCACTTTCTTCCAGCGTCTTTCTAAAGCTTTCCATGGCTACGACTCCCACTTCAAGCTTGTACTCCTCTGCACCACCGTTAGCGGTGGTGGACTTTTGGCATACGGCGAGGCGGTAGCTCAATCGGAAGCGGCGGTAGTGAAGGAGGAGAAGAAGAAGGTGGTGGTGCTGGGGACAGGTTGGGCAGGGACGAGCTTCTTGAAGAATCTGGAGAATCCCAGATATGAGGTCCACGTGGTGTCTCCTCGCAACTATTTTGCCTTCACGCCTTTGCTTCCTAGTGTCACGTGCGGCACCGTCGAGGCCCGTAGCATCGTTGAACCCGTTCGCAACATCTTTAGGAAGAAAAATGTGAAAGTAGACTTCAGTGAAGCAGAATGTCTCAAGATTGACGCAGCAAACAGGAAAGTTTACTGTCGATCAAGTATAAGCAATAATTCGAATGAAAAAGATGAATTTGTTGTGGACTATGACTTCCTGATCATAGCCGTGGGAGCAAATGTAAACACATTCAATACTCCCGGGGTGGTGGAGAATTGCCATTTCTTGAAGGAAGTTGAAGATGCACAGAAGATCAGAAGAACAGTTATTGACTGCTTTGAGAGGGCAAGCTTGCCTAGTGTAAGTGAGGAAGAGAAGAAGAGAATCCTTCATTTTGCTATTGTCGGAGGTGGTCCGACCGGGGTGGAGTTTGCAGCCTCTCTTCATGACTTCGTCAATGAAGACTTGGTTAAATTATATCCCGGTATAAAAGATTTGGTTAAGATTACGCTTCTGGAGGCAGGGGAACATATTTTGAGCATGTTTGACAAAAGAATCACTTCTTTTGCTGAGGACAAGTTCCGAAGAGATGGCATCGATGTGAAAACTGGATCCATGGTTGTGAAGGTATCTGATAAAGAAATTTCGACTAAAGAAATGAAAAATGGAGGAGAAATCACTACAATGCCATATGGAATGGCTGTCTGGTCAACTGGCATTGGGACTCGTCCATTTATTAGAGATTTTATGACACAAATTGGCCAGATTAACAGGCGTGCTGTTGCTACCGATGAATGGTTGAGAGTTGAGGGAACCAACAATGTGTATGCACTTGGAGATTGTGCTACAATAAACCAGCGAAAAGTCATGGAAGATATTGCGGCAATCTTTAAGAAGGCGGACAAAGACAACTCAGGAACCCTCACGGTCAAAGAATTTCAAGAGGTATTGGATGATATCTGTGAGAGATACCCTCAGGTAGAACTGTATCTGAAGACTAGACAAATGAATGATATTGCTGATCTGTTGAAAGAAGCCAAGGGAGATGTTGCAAAGGAATCTATTGAGCTGAGTATCGAAGAACTAAAAACTGCACTTTCTAAAGTGGATTCTCAAATGAAGTTTCTTCCTGCTACAGCACAGGTTGCATCTCAGCAAGGCACCTACCTTGCCAAGTGCTTTAATCGGATGGAAGAGTGTGAAAAGAATCCAGAGGGTCCTATCAGGTTCAGGGGAGAAGGACGCCATAGGTTCAAACCCTTCAGGTACAAGCATTTAGGTCAATTTGCTCCTCTGGGAGGAGAGCAGGCAGCTGCACAGCTTCCTGGTGATTGGGTTTCAATTGGTCATAGCACTCAATGGCTTTGGTATTCTGTCTATGCAAGCAAGCAAGTTAGCTGGCGCACACGGGCATTAGTTGTATCAGACTGGACAAGGCGTTTTATTTTTGGAAGGGACTCAAGTCAAATCTGA	1743	0.4498	MRTFTFFQRLSKAFHGYDSHFKLVLLCTTVSGGGLLAYGEAVAQSEAAVVKEEKKKVVVLGTGWAGTSFLKNLENPRYEVHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFRKKNVKVDFSEAECLKIDAANRKVYCRSSISNNSNEKDEFVVDYDFLIIAVGANVNTFNTPGVVENCHFLKEVEDAQKIRRTVIDCFERASLPSVSEEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVKLYPGIKDLVKITLLEAGEHILSMFDKRITSFAEDKFRRDGIDVKTGSMVVKVSDKEISTKEMKNGGEITTMPYGMAVWSTGIGTRPFIRDFMTQIGQINRRAVATDEWLRVEGTNNVYALGDCATINQRKVMEDIAAIFKKADKDNSGTLTVKEFQEVLDDICERYPQVELYLKTRQMNDIADLLKEAKGDVAKESIELSIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGEQAAAQLPGDWVSIGHSTQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI	580

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip02g03027	580	SUPERFAMILY	EF-hand	371	467	IPR011992	-
	Aip02g03027	580	SUPERFAMILY	FAD/NAD(P)-binding domain	216	375	IPR036188	-
	Aip02g03027	580	SMART	efh_1	382	410	IPR002048	GO:0005509
	Aip02g03027	580	Gene3D	-	46	414	-	-
	Aip02g03027	580	Gene3D	-	422	579	-	-
	Aip02g03027	580	PRINTS	FAD-dependent pyridine nucleotide reductase signature	28	47	-	-
	Aip02g03027	580	PRINTS	FAD-dependent pyridine nucleotide reductase signature	160	178	-	-
	Aip02g03027	580	PRINTS	FAD-dependent pyridine nucleotide reductase signature	221	239	-	-
	Aip02g03027	580	ProSitePatterns	EF-hand calcium-binding domain.	391	403	IPR018247	-
	Aip02g03027	580	PANTHER	NAD(P)H DEHYDROGENASE B2	3	580	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip02g03027	Aip-Chr2	106845704	106851174	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip02g03027	1	580	Chloroplast and Mitochondria Gene Families	AT4G21490	73.928	0.0	883

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip02g03027	K03885		-	gmx:100809915	1050.43

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