Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02972 ATGCGATTTCCACTCTCACACTCACTCCGTTTAGCTTCTTCCCTCCGCACCAAGTCAAACAAGTTTCAATTCCACCACTTCACCACCACCACCACCGCCACGCCGGAACTACGACCCGACCCGCCACCTATTCGAGTCGGCCTCACAGACTCGGCGGGGCGCGGTGTCTTCGCCCCCCGTCCGATCGGCACCGGAGAACTCATTCACACCGCCAAGCCCGCCGTATGCCACCCTTCTCCCAACGTTCTCCACACTGTCTGTTACTGCTGCCTCCGCAGAATCTCTAATCCCGATGGCTCCGAAGCTCAACGCGTGTCGTTTTGCAGTGAAGATTGTAAACGACGCTGCATGGAATTTTACAATGTTGAGATGAAAGCAGATTGGGCGGCTTTTGATGACTATTGCGGGACCCATGGTTTGAAATATCCTTTCATGGTGAAGCGGTTGGCTTGCATGGTCATATCAGGAGTTGCCAGAAGTGACAGTGTTGACATACTTCAACCTGCCAATTTGACACCTCAGATGATTTCACGGATGGAAGAAGAGTTTGGCTTGTTATGGAATGCTTTCAGAAAGACACTTATTTCAGATGAAGATATTTCTTTTTTAACCAAGCAATGGTACATTGGTGTTTTGGCACGAATTCGAATCAATGCATTTCGCATTGAGTTGGCTGCTGGGCTATATGAAGATCTTCTTTCGTCAGCAGCGGCATCTGTAGAAGCTGAAGCTGCCGTTGGACATGCTGTCTACATACTTCCGTCCTTCTACAATCATGATTGTGATCCAAATGCGCACATTATATGGATAGATAACGCAGATGCAAAATTGAAGGCCCTTCGTGATGTTGACGAAGGTGAAGAACTTAGAATCTGCTACATTGATGCCAGCCTGGACCGCGATGCTCGGCAAGAACTTTTATCTCGGGGATTTGGTTTTCAATGCAACTGTACCAGTGAATGGCACCATGCAAGGAGGAAGAACAATGTTGTGTTCTGCCAAGGTGGTGGAAATGTGATCAAGTCTGCTGGCATGTCTTCCGTGTTAACAGAAAGATCAGCATCGTTTAGCGCTGATCACGCCACGACTCTAATGGATGCAGGAAGCTTGGTCTTGTCTCAAAATGGGAAAAGCCAGACAGATATTGTGGTGAAGGATTTGGTGCCTTATGGTGGACCAACATCCACCACATTAGTAGGATTTGAAGATGGAATAGGCATTGTCAAATTCCTAAGAGGGAAGAAGTTTTTTATTACAGGTGCAACCGGTTTTCTAGCAAAAGTTCTTATTGAGAAGATTCTAAGAACAGAACCAGATGTTGGAAAGATTTACCTTTTGATCAAGGCAAAGAATAAGCAAGCTGCAATGGAGAGATTACAGAATGAAATAATAAATACAGAGCTTTTCAAATGCCTTAGACAAATCCATGGAAAATCCTACAAAGCCTTTATGTTGAGCAAGCTAGTACCTGTAGTAGGCAACATTTGCGAATCGAATCTTGGACTAGATGAAGATTCTTCCAATGTTATTATGGATGAGGTAGATGTAATTGTAAATTCTGCAGCTAATACAACATTTGATGAAAGATATGATACTGCTATCAACATAAACACCAAAGGACCGTGTCGCCTTATGAACATTGCGAAAAAATGCAAGAAGCTTAAGCTCTTTCTGCATGTTTCAACAGCTTATGTCAATGGACAAAGACAAGGAAGAATTATGGAAAGACCATTTAGCATTGGAGATTGCATAGCTAGAGAAAAATCCATCTCTGAAATTCCACAAAGTTTTCTTCCAGCATTGGACATCGAAGGCGAAATAAACATGGTTTCGAATTACAATGGGAACATTGAAGACAACTTACTAGCTCAAAAGATGAGGGAGATGGGTCTAGAAAGGGCTAGAAGATATGGGTGGCAAGATACTTATGTGTTCACAAAAGCTATGGGAGAAATGATGATTGATAAATTGAGGGAAGATATTCCAGTTGTTGTAATTCGTCCAAGCGTTATAGAAAGCACTTTTAAAGAACCATTTCCTGGATGGATGGAAGGAAATAGGATGATGGATCCAATAGTTCTATGCTATGGGAAAGGACAGCTAACAGGTTTCTTGGTAGATCCAAATGGGGTACTTGATGTGGTTCCATCTGACATGGTTGTTAATGCAACCTTGGCAGCAATGGCAAGACATGGAATGGATCAAAAGCGAGATATCAATGTGTATCAAATTGCTTCATCTGTAGTGAACCCTTTGGTGTTCCAAGACCTTGCAAGATTGCTCTATGAACATTATAGCTCCTCTCCATGCATTGACTCAAAGGGTAGGCCAATTCAAGTTCCATTGATGAAGTTGTTTAGCTCCACAGAGGAATTCTCTGGCCACTTATGGAGAGATGCTATTCAGAAGAGTGGACTCACAGCTATGGCCTCATCAAAGGGGAAGATGTCTCAGAAACTTGAAAATATTTGTAGAAAATCAGTGGAGCAAGCAAAGTACTTAGCCAATATTTATGAACCATACACATTTTATGGTGGAAGGTTTGATAACAGTAACACAGAAAGATTAATGGAAATCATGTCTGAAGAAGAAAAAAGGGAATTTGGATTTGATGTAAAGGCAATAGATTGGAAAGATTATATCACCAATGTTCATATACCAGGTCTAAGGAGACATGTCATGAAGGGAAGGGGAATGGGTAGTTAG 2706 0.4254 MRFPLSHSLRLASSLRTKSNKFQFHHFTTTTTATPELRPDPPPIRVGLTDSAGRGVFAPRPIGTGELIHTAKPAVCHPSPNVLHTVCYCCLRRISNPDGSEAQRVSFCSEDCKRRCMEFYNVEMKADWAAFDDYCGTHGLKYPFMVKRLACMVISGVARSDSVDILQPANLTPQMISRMEEEFGLLWNAFRKTLISDEDISFLTKQWYIGVLARIRINAFRIELAAGLYEDLLSSAAASVEAEAAVGHAVYILPSFYNHDCDPNAHIIWIDNADAKLKALRDVDEGEELRICYIDASLDRDARQELLSRGFGFQCNCTSEWHHARRKNNVVFCQGGGNVIKSAGMSSVLTERSASFSADHATTLMDAGSLVLSQNGKSQTDIVVKDLVPYGGPTSTTLVGFEDGIGIVKFLRGKKFFITGATGFLAKVLIEKILRTEPDVGKIYLLIKAKNKQAAMERLQNEIINTELFKCLRQIHGKSYKAFMLSKLVPVVGNICESNLGLDEDSSNVIMDEVDVIVNSAANTTFDERYDTAININTKGPCRLMNIAKKCKKLKLFLHVSTAYVNGQRQGRIMERPFSIGDCIAREKSISEIPQSFLPALDIEGEINMVSNYNGNIEDNLLAQKMREMGLERARRYGWQDTYVFTKAMGEMMIDKLREDIPVVVIRPSVIESTFKEPFPGWMEGNRMMDPIVLCYGKGQLTGFLVDPNGVLDVVPSDMVVNATLAAMARHGMDQKRDINVYQIASSVVNPLVFQDLARLLYEHYSSSPCIDSKGRPIQVPLMKLFSSTEEFSGHLWRDAIQKSGLTAMASSKGKMSQKLENICRKSVEQAKYLANIYEPYTFYGGRFDNSNTERLMEIMSEEEKREFGFDVKAIDWKDYITNVHIPGLRRHVMKGRGMGS 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02972 901 Pfam Male sterility protein 822 895 IPR033640 -
Aip02g02972 901 Gene3D - 409 835 - -
Aip02g02972 901 Gene3D SET domain 55 318 IPR046341 -
Aip02g02972 901 Pfam Male sterility protein 418 724 IPR013120 -
Aip02g02972 901 CDD FAR_C 819 894 IPR033640 -
Aip02g02972 901 Pfam SET domain 53 293 IPR001214 GO:0005515
Aip02g02972 901 Gene3D - 138 219 - -
Aip02g02972 901 PANTHER FATTY ACYL-COA REDUCTASE 390 896 - -
Aip02g02972 901 ProSiteProfiles SET domain profile. 42 294 IPR001214 GO:0005515
Aip02g02972 901 SMART set_7 42 300 IPR001214 GO:0005515
Aip02g02972 901 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 407 736 IPR036291 -
Aip02g02972 901 SUPERFAMILY SET domain 42 318 IPR046341 -
Aip02g02972 901 PANTHER MALE STERILITY PROTEIN 2-RELATED 390 896 IPR026055 GO:0080019
Aip02g02972 901 CDD FAR-N_SDR_e 414 769 - -
Aip02g02972 901 CDD SET_SMYD 247 318 - -
Aip02g02972 901 Gene3D - 86 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02972 Aip-Chr2 106338853 106347415 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02972 345 898 Acyl Lipid Metabolism Gene Families AT3G11980 66.488 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip02g02972 NAD_binding_4 7.8e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02972 K13356 - gmx:100776505 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02972 02 106338853 106347415 Aip02g02972 02 106338853 106347415 ECH