Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip02g02960 | ATGTCGGAGTTCGTCGCCGGCGACGAGGGCCGGGTCCTTCCGATTTGCCGCCACGCTTTTCATTCGCAATGCATAGATGCGTGGTTGGGTTCTCACTCGAGTTGCCCGCTTTGTAGAAAACCGGTTCATCCGGTTCAAGACGGTTCGGTCGTTATTGAACCGGGTCTGGAGAAGTGGTTTCCTGAACCGATTTGGTGCCCGAAGAAGAAACCGTTGGAGATGGAATTGGAATTGGAGAAAGTGCAGAAGATGAAGAATAGTAGTTACTGTATAAATATCATGGCTCTTTAA | 291 | 0.4948 | MSEFVAGDEGRVLPICRHAFHSQCIDAWLGSHSSCPLCRKPVHPVQDGSVVIEPGLEKWFPEPIWCPKKKPLEMELELEKVQKMKNSSYCINIMAL | 96 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip02g02960 | 96 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 1 | 46 | - | - | |
Aip02g02960 | 96 | SUPERFAMILY | RING/U-box | 1 | 45 | - | - | |
Aip02g02960 | 96 | PANTHER | RING-H2 FINGER PROTEIN ATL64 | 1 | 46 | - | - | |
Aip02g02960 | 96 | Pfam | Ring finger domain | 3 | 39 | IPR001841 | - | |
Aip02g02960 | 96 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 43 | IPR013083 | - | |
Aip02g02960 | 96 | ProSiteProfiles | Zinc finger RING-type profile. | 16 | 39 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip02g02960 | Aip-Chr2 | 106183443 | 106183866 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip02g02960 | 1 | 47 | C3H Transcription Factor Family | AT1G53820 | 57.447 | 9.84e-16 | 68.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip02g02960 | - | - | ahf:112728565 | 203.371 |