Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02945 ATGAGCCGCGGAGCAGGAGCTGGTGGAGCGAAGGGGAAGAAGAAGGGAGCGAGCTTCGTGATCGATTGCGCGAAGCCCGTTGAGGATAAGATCATGGACATCGCATCGCTCGAGAAGTTCCTTCAAGAGAGGATCAAGGTCGGAGGCAAAGCCGGTGCTCTCGGCGATTCCGTCACCGTTACAAGGGACAAGTCCAAGATCACCGTCACCTCCGATTCCAGCTTCTCCAAGCGATACCTGAAATACTTGACTAAGAAGTACTTGAAAAAGCACAATGTGAGGGATTGGCTTCGTGTGATCTCCTCCAACAAGGACAGGAATGTGTATGAGTTGAGATACTTCAACATTGCCGAGAATGAGGGTGAAGAGGAAGAGTGA 378 0.5132 MSRGAGAGGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSSFSKRYLKYLTKKYLKKHNVRDWLRVISSNKDRNVYELRYFNIAENEGEEEE 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02945 125 Pfam Ribosomal L22e protein family 15 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Aip02g02945 125 Gene3D - 7 125 IPR038526 -
Aip02g02945 125 PANTHER 60S RIBOSOMAL PROTEIN L22 1 125 IPR002671 GO:0003735|GO:0005840|GO:0006412
Aip02g02945 125 PANTHER - 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02945 Aip-Chr2 105987671 105989416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02945 1 125 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 86.400 6.30e-66 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02945 K02891 - pop:7487786 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02945 02 105987671 105989416 Aip02g02945 02 105987671 105989416 ECH