Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02915 ATGGTTGAAACTAGACGCAGTTCTTCCCAATCCTCAACCAAACGCACCCTCTCTTCGCCTTCTCCTTCTAACCCCAACAAAAGATCAAAGGTTTCTACCAACACCACAGAGGATGCATCGTCCACGACGCTTCCTGTTGCTGCTGCTCCTCCTGTGAACGAATCTGGACCCGGGAATGATGATCTACCCGAGACGGCGTCGTTGAAGGCCGTTGATGCTTGCAGCGATGATGTTTTGCCAGAAACTTTGTCGTTGAAGGCCACGCCTCCTTCTTTGCCGGCGGCAGAAGGGGATGATTTGGTGACGCCTCAGTCCATAGGTGAGGATGCGGTGGATGGAGAGAAATCAAGTGCTGCGGCGGCTTTGGCGGCGGCTGCTGCTGCCGGCCGAATGAAGAAGCGGTCAGTGAAATCGAAATCAGGACCTAAGACAGCATGGGGGAAGCTCCTTTCTCAGTGTTCTCAGATTCCTCACCAGCCTATGTGTGATCCTACCTTCACCATTGGCCAAGGTCGTCAGTGCAATTTATGGCTTAAAGATCCAACTGTTGGCAATATTTTGTGCAAGTTGAGCAACATCGAGCGTGGAGGTTCACCTGTTGCATTACTGGAAATCACAGGAGGCAAAGGTGCTGTTCAAGTTAATGGTAAGACCTATCGCAAGAATGCACGCCTTATATTAAGTGGAGGTGATGAGGTGGTCTTCGGTTCTTCTGGCAAGCATGCTTATATCTTTCAGCAGCTCACAAATAATAATGTTGCTACCACTGGCATACCTTCTTCTGTGAGTATTTTAGAAGCTCAGAGTACTCCAGTGAATGGAATGCAAGTTGAAGCTAGATCAGGGGACCCTTCCGCTGTTGCTGGAGCATCAATATTAGCCTCATTATCTAATCTTCATAAAGATTTAGCTCGCCTTCCGCCTGCTGCTAAAGCTGGCAAGAATGTCCAACAAAACACAGATGCTTCATCACTACCTTCTGGCAATGGGGATGGTGTTCGAGACAATGAAGTGAAGGATATCACCAATACCGACGAGCAAACTGGAGCTGTTTCTGCTGAGAAAACTGTTCTTGCATCTTCTGCTATTGGTAACGAAAATCCTAGTGTTGACACCATGGAGGTTGATGCCAATGTGGATACAGATGCTGGGAAGATGGCTGCTGCTGCTACCTGTGAATTAAGGCCGTTGCTGCGCATGCTTGCTGGTTCATATCCTGATTTTGATTTAAGTAGTAGCATTACAAAGATATTGGAGGAGCGAAGGGAATTAAGAGAACTTCTTAAAGATGTTGATACCCCAGCAATATTGGCATCAACCAGGCGGCAAGCTTTTAAGGAGAGTTTACAACAAAGAGTTCTTAGTGCTGACAATATTGATGTCTCATTTGAAAGTTTCCCATACTATCTAAGCGATACGACAAAGACCGTTTTGATTGCTTCGACATATATTCATTTGAAGTGTAATGGCTTTGGAAAATTTGCCTCAGACCTCCCCTCAGTGTCCCCACGGATATTGTTATCTGGACCTGCAGGTTCGGATATATATCAGGAGACTCTTGCCAAGGCACTTGCAAAGCATTTTGGTGCAAGGCTACTAATTGTGGATTCTCTTTCACTACCTGGTGGAACTCCATCAAAGGAAGTTGATTCTGCTAAAGAAAGTTCAAAGCCTGAACGACCATCTGTGTTGGCCAAGAGAAGTACACATGCTGCTTCTTTAAAACATAGTAAACCAGCTTCTAGTGTTGATGCTGAAATTGTGGGTGGATCCACAATAAGTTCTCAGGCTATGCTGAAGCAGGAGGTTTCTACTGCTTCATCAAAAGGCACTACTATTAAAACAGGTGATCGAGTAAAATTTGTTGGTAACTTCCCTTCTGCTGTCTCATCAATACAAAATTTTCCTTCAAGGGGACCAAGCTATGGCTCTCGTGGAAAAGTTATGCTTGCATTTGAAGATAATGGGTCTTCGAAGATTGGGGTTAGGTTTGATAAATCAATTCCTGATGGCAATGATCTTGGTGGTCTTTGTGAAGATGATCGCGGGTTCTTTTGTTCTGCAAATCATTTGTTGAGAGTAGATGGTTCAGGGGGCGATGACGTTGACAAGATTGCAGTTCAAGAAATCTTTGAGGTTGTTACCAGTCAGAGTCAAAACGGAGCAGTGGTATTATTCATTAAAGACATAGAGAAGGCAATGGTTGGGTACACCGAGATGTTGAAAATTAAATTTGAAAGCTTGCCACAGAATGTGGTGGTAATTGCCTCTCATACCCAGCTGGACAATCGAAAGGAGAAGACACAACCTGGTGGCCTTCTATTTACGAAGTTTGGGAGCAATCAGACAGCACTACTAGATCTTGCTTTTCCGGATAATTTTGGTAGACTGCACGATAGGAGCAAAGAAACACCCAAAGTAATGAAGCAACTTGGTCGCCTCTTCCCAAACAGAGTGACTATACAGCTGCCTCAGGATGAGACCTTGCTTTCTGATTGGAAGCAGCAGCTAGAGCGTGATGTTGAGACTATGAAAGCTCAGTCTAATGTTGTGAGCATTCGCACGGTTCTCAGCAGAGTTGGATTGGAATGTCCTGACTTGGAGACTGTCTGCATCAAAGATCAAGCCCTAACAACCGAAAGTGTGGAAAAGATCATTGGTTGGGCAATAAGTTACCAGCTTATGCACTCATCTGAACCCTTATCCAAAGATTCTAAGCTTGTTCTGTCTGCAGAAAGCATTAATTATGGGCTGAACATTCTGCATGGCATTCAAAATGAAAACAAGAGCTTAAAGAAATCATTGAAGGATGTGGTTACCGAGAATGAATTTGAGAAAAAATTGCTTGGTGATGTTATTCCACCAACCGATATTGGGGTGACATTCGATGATATTGGAGCTTTGGAAAATGTGAAGGACACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCGGAATTGTTTTGCAAAGGGCAGCTGACTAAGCCTTGCAAAGGAATATTGCTTTTTGGCCCCCCTGGCACAGGAAAAACTATGCTTGCAAAAGCTGTAGCAACCGAAGCTGGAGCGAATTTTATCAACATTTCAATGTCCAGCATTACTTCGAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTTTCACTGGCCAGCAAGATTGCTCCAAGTGTTATTTTCGTCGATGAGGTTGATAGTATGTTGGGAAGACGGGAAAATCCAGGTGAGCACGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTTAATTGGGATGGTCTGCGTACAAAGGATAAAGAACGTATACTTGTTCTTGCTGCTACGAATAGGCCATTTGATCTTGATGAAGCTGTTATTAGGAGGCTTCCACGAAGATTGATGGTTAATTTGCCAGATGCTCCAAATAGAGAAAAAATTCTAAAAGTCATTTTAGCAAAGGAAGATTTGGCAATGGACGTTGATTTGGATGCGTTGGCAAATATGACTGATGGATATTCAGGGAGCGATCTAAAGAATCTTTGCGTCACAGCGGCTCACTGCCCAATAAGAGAGATCTTGGAGAAGGAGAAGAAGGAGAGAAGTTTAGCACAAGCTGAGAACAAACCTTTGCCGAGATTGTGTAGCAGTGCCGATATTCGACCCTTAAAGATGGAAGATTTTAAATATGCACATGAGCAGGTGTGCGCGAGTGTGTCATCGGAATCAAACAATATGAATGAGCTACTCCAATGGAATGACCTTTACGGAGAAGGCGGCTCGAGAAAAATGAGATCATTGAGCTATTTCATGTGA 3798 0.4405 MVETRRSSSQSSTKRTLSSPSPSNPNKRSKVSTNTTEDASSTTLPVAAAPPVNESGPGNDDLPETASLKAVDACSDDVLPETLSLKATPPSLPAAEGDDLVTPQSIGEDAVDGEKSSAAAALAAAAAAGRMKKRSVKSKSGPKTAWGKLLSQCSQIPHQPMCDPTFTIGQGRQCNLWLKDPTVGNILCKLSNIERGGSPVALLEITGGKGAVQVNGKTYRKNARLILSGGDEVVFGSSGKHAYIFQQLTNNNVATTGIPSSVSILEAQSTPVNGMQVEARSGDPSAVAGASILASLSNLHKDLARLPPAAKAGKNVQQNTDASSLPSGNGDGVRDNEVKDITNTDEQTGAVSAEKTVLASSAIGNENPSVDTMEVDANVDTDAGKMAAAATCELRPLLRMLAGSYPDFDLSSSITKILEERRELRELLKDVDTPAILASTRRQAFKESLQQRVLSADNIDVSFESFPYYLSDTTKTVLIASTYIHLKCNGFGKFASDLPSVSPRILLSGPAGSDIYQETLAKALAKHFGARLLIVDSLSLPGGTPSKEVDSAKESSKPERPSVLAKRSTHAASLKHSKPASSVDAEIVGGSTISSQAMLKQEVSTASSKGTTIKTGDRVKFVGNFPSAVSSIQNFPSRGPSYGSRGKVMLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGGDDVDKIAVQEIFEVVTSQSQNGAVVLFIKDIEKAMVGYTEMLKIKFESLPQNVVVIASHTQLDNRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFGRLHDRSKETPKVMKQLGRLFPNRVTIQLPQDETLLSDWKQQLERDVETMKAQSNVVSIRTVLSRVGLECPDLETVCIKDQALTTESVEKIIGWAISYQLMHSSEPLSKDSKLVLSAESINYGLNILHGIQNENKSLKKSLKDVVTENEFEKKLLGDVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILKVILAKEDLAMDVDLDALANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSLAQAENKPLPRLCSSADIRPLKMEDFKYAHEQVCASVSSESNNMNELLQWNDLYGEGGSRKMRSLSYFM 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02915 1265 CDD FHA 163 246 IPR000253 GO:0005515
Aip02g02915 1265 Pfam ATPase family associated with various cellular activities (AAA) 1001 1130 IPR003959 GO:0005524|GO:0016887
Aip02g02915 1265 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1265 - -
Aip02g02915 1265 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1265 - -
Aip02g02915 1265 MobiDBLite consensus disorder prediction 1 48 - -
Aip02g02915 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 960 1237 IPR027417 -
Aip02g02915 1265 MobiDBLite consensus disorder prediction 1 65 - -
Aip02g02915 1265 CDD AAA 999 1132 - -
Aip02g02915 1265 Gene3D - 959 1238 IPR027417 -
Aip02g02915 1265 Gene3D - 145 255 - -
Aip02g02915 1265 MobiDBLite consensus disorder prediction 313 330 - -
Aip02g02915 1265 MobiDBLite consensus disorder prediction 550 564 - -
Aip02g02915 1265 MobiDBLite consensus disorder prediction 310 355 - -
Aip02g02915 1265 SMART AAA_5 997 1134 IPR003593 -
Aip02g02915 1265 MobiDBLite consensus disorder prediction 544 580 - -
Aip02g02915 1265 Gene3D - 1133 1227 - -
Aip02g02915 1265 Pfam AAA+ lid domain 1154 1190 IPR041569 -
Aip02g02915 1265 ProSitePatterns AAA-protein family signature. 1104 1123 IPR003960 GO:0005524|GO:0016887
Aip02g02915 1265 SUPERFAMILY SMAD/FHA domain 146 241 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02915 Aip-Chr2 105576185 105585296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02915 996 1201 Calmodulin-binding Proteins AT3G56690 35.407 9.28e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02915 - - gmx:100801477 1952.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02915 02 105576185 105585296 Aip02g02915 02 105576185 105585296 ECH