Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02908 ATGATCTCAGGAAGCATTCCTGGGGCCATTTCTGGATTGCAAAATTTGCAAATTCTCAACTTATCACAAAATAAATTGGTAGGGGGTATTCCTGATTCACTTGGAAGTTTGATAAGTTTGACAGATTTGGACTTATCTCAAAACAACTTGTTTGGCTTGATTCCAAGATCACTGGAGTCACTTCATTATCTTGAATTCATCAATCTTTCTCATAATAGTTTGGAAGGAGAGATTCCGAGTGGTGGACCTTTCAAAAATTTCACTGCTCAATCTTTCATGTTTAATAAAGCACTTTGTGGAAATGCCAGATTACAAGTCCCAGCATGCAGTAAAGTAAAGAAGAAAGGATCAAATGCAAACATATTCTTCATCAAATGCATATTGCCTATAATGGTTTCAATCATTCTAGTTGTTTTCTGTGTGTTTTTTCTCGTCAAGCGTCGAAGAAAGAATGGTGGTGATACTAATGAAGGAACATTATCAGCATTACCAACAGCTAGAATGATTTCGTACTATGAACTATCACAGGCAACTAATGGTTTTGATGAGAGTAATTTGCTTGTTAGGGGCAATTTTGGCTCTGTGTTCAAAGGTTTACTTTCAAATGGGATGGTGGTTGCTGTCAAAGTGTTTAACTTGGACTTGGAATTAGGATCAAAGAGCTTCAGTGTAGAATGCAAAGCAATGCGCAATCTGCGCCATCGAAATCTCATGAAGATCATAGGTTGTTGTTCAAGTATAGATTACAAGCTTTTAGTGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAGATGTGGCATCTGCATTGGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTCATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATGGTTGGCCATGTCAGTGACTTTGGCATTGCCAAATTGCTTGGCGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACCGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGTATACATTTTTGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTGTTCTCAGTTATGTACAATTCACTCAGCTGCTTGATTTTGCAGATTTCGCTGATGATGGTTCCCTGCAGACGGTTGTTGCCAAGACTTAAATATTga 1290 0.3837 MISGSIPGAISGLQNLQILNLSQNKLVGGIPDSLGSLISLTDLDLSQNNLFGLIPRSLESLHYLEFINLSHNSLEGEIPSGGPFKNFTAQSFMFNKALCGNARLQVPACSKVKKKGSNANIFFIKCILPIMVSIILVVFCVFFLVKRRRKNGGDTNEGTLSALPTARMISYYELSQATNGFDESNLLVRGNFGSVFKGLLSNGMVVAVKVFNLDLELGSKSFSVECKAMRNLRHRNLMKIIGCCSSIDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMIDVASALEYLHHGSSPIVVHCDVKPCNVLLDEDMVGHVSDFGIAKLLGEGQSKEYTKTMATVGYIAPEFGSKGIISTKGDVYIFGIMLMETFTRKKPTDDLFVAGLSMKGWISESLFSVMYNSLSCLILQISLMMVPCRRLLPRLKY 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02908 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Aip02g02908 429 Gene3D Transferase(Phosphotransferase) domain 1 257 417 - -
Aip02g02908 429 Gene3D Phosphorylase Kinase; domain 1 145 256 - -
Aip02g02908 429 Gene3D Ribonuclease Inhibitor 1 117 IPR032675 -
Aip02g02908 429 ProSiteProfiles Protein kinase domain profile. 181 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02908 429 SUPERFAMILY L domain-like 2 99 - -
Aip02g02908 429 Pfam Leucine rich repeat 15 74 IPR001611 GO:0005515
Aip02g02908 429 SMART serkin_6 181 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02908 429 SUPERFAMILY Protein kinase-like (PK-like) 162 398 IPR011009 -
Aip02g02908 429 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 2 403 - -
Aip02g02908 429 PANTHER RECEPTOR-LIKE PROTEIN 55 2 403 - -
Aip02g02908 429 PRINTS Leucine-rich repeat signature 61 74 - -
Aip02g02908 429 PRINTS Leucine-rich repeat signature 40 53 - -
Aip02g02908 429 Pfam Protein tyrosine and serine/threonine kinase 186 380 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02908 Aip-Chr2 105443704 105445313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02908 2 80 Receptor kinase-like Gene Family AT3G47570 46.835 2.89e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip02g02908 PK_Tyr_Ser-Thr 2.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02908 - K13420 aip:107633486 742.651