Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02879 ATGATGGCTTTGAATTCAAGCTTAGGTGTTATGAAATTGGAGTTGTTTTCGTCGTCGCCGGATTCAGCCTCTGTGGATTCCATTACTCTGTTTGTGCTTCTTCTTTGTGCTTGCGTTCTCATTGGCCATCTTCTAGAAAAGAGTCGATGGATGACTGAGTCAGTTGTTGCCCTAATTATTGGTCTTTTCACCGGGACCATAATTCTAATGACAACTAGGGGGAAAAGTTCGCACATTTTGGTGTTCGATGAGGAGCTTTTCTTTATTTATCTTCTTCCGCCAATTATATTCAATGCAGGGTTCCAAGTGAAAAAGAAACAATTCTTTCGGAACTTTTTGGCCATTATTTTGTATGGTGTTATTGGAAGTTTAATATCATTTCTCATCGTATCTCTTGGTTCCTTACAGTTGTTCAAAACATTGGATCTGGATTTGATGGAATTGGCAGATTATTTTGCACTCGGAGCTGTATTCTCAGCGACAGATTCTGTGTGCACATTACAGGTGCTTAATCAGGAAGAGACACCTCTCCTATATAGTCTAGTTTTCGGTGAAGGCGTGGTCAATGATGCAACTTCCGTGGTTCTTTTCAACGCAATCCAGAAATTCGACCTCTCACATATCACCTCAGTCAATGTCATGCAGTTCATCGGCAATTTCTTTTATTTATTCCTGACAAGCACTTTCCTGGGAGTAGCGGTTGGCTTGCTCAGTGCTTACATTATAAAGAAGTTGTACTTTGGCAGGCATTCAACTGACAGAGAAATCGCGCTTATGATCCTGATGGCTTACTTCTCTTATATGTTGGCTGAACTTCTTGATTTGAGTGGGATCCTTACTGTGTTCTTTTGTGGGATTGTCATGTCACACTATACCTGGCATAATGTTACCGAAAGTTCTAGGATCACAAGCAGGCATGCTTTTGCAACCTTTTCTTTCGTGTCCGAGATTTTCATCTTCTTGTATGTTGGTATGGATGCCTTGGACATGGAGAAGTGGAGATTCGCCAGCAATAGTCCATGGACATTACTTGGGGCCTGTGGAATACTGCTTTGCTTGGTTCTGCTCGGAAGGGCCGCTTTCGTGTTCCCCCTTTCATTCATAGCTAATTTGTTCAGGAAATCCAAGGCTGATAAGATTGCATTCAAGCAGCAGTTTGTAATATGGTGGGCCGGGCTCATGCGAGGCGCTGTCTCCATTGCACTTGCATATAATAAGTTTACTAGAAAGGGGCATACTCAACTGCAAGGGAATGCTATCATGATCACCAGCACCATCACAGTTGTTCTATTCACTAATGTGGTGGGTGGATTACTAACCAAGCCTCTAATAAGGTCATTGCTCGGTGGGAACTCAATGTCATCTGACTCATTTTCTTCCAAGACACTGCCACTTCTCTCAAGTAGACAAGAATCAGAATCCAACATAGATACCGGCAACCCCATCGATTCAAGCCAAGTTGTCCACCATTATTGGAGAAGGTTCGACGACAGGTTCATGCGTCCGATGTTCGGAGGCAGAGGGTTTGTACCTGTCGTTCCAAGTTCACCTACAGAAGATAGCAGTCTACATTAG 1575 0.4298 MMALNSSLGVMKLELFSSSPDSASVDSITLFVLLLCACVLIGHLLEKSRWMTESVVALIIGLFTGTIILMTTRGKSSHILVFDEELFFIYLLPPIIFNAGFQVKKKQFFRNFLAIILYGVIGSLISFLIVSLGSLQLFKTLDLDLMELADYFALGAVFSATDSVCTLQVLNQEETPLLYSLVFGEGVVNDATSVVLFNAIQKFDLSHITSVNVMQFIGNFFYLFLTSTFLGVAVGLLSAYIIKKLYFGRHSTDREIALMILMAYFSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRITSRHAFATFSFVSEIFIFLYVGMDALDMEKWRFASNSPWTLLGACGILLCLVLLGRAAFVFPLSFIANLFRKSKADKIAFKQQFVIWWAGLMRGAVSIALAYNKFTRKGHTQLQGNAIMITSTITVVLFTNVVGGLLTKPLIRSLLGGNSMSSDSFSSKTLPLLSSRQESESNIDTGNPIDSSQVVHHYWRRFDDRFMRPMFGGRGFVPVVPSSPTEDSSLH 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02879 524 PANTHER SODIUM/HYDROGEN EXCHANGER 10 520 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aip02g02879 524 Pfam Sodium/hydrogen exchanger family 32 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip02g02879 524 PRINTS Na+/H+ exchanger signature 86 97 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip02g02879 524 PRINTS Na+/H+ exchanger signature 100 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip02g02879 524 PRINTS Na+/H+ exchanger signature 115 123 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip02g02879 524 PRINTS Na+/H+ exchanger signature 155 165 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip02g02879 524 Gene3D - 25 448 IPR038770 -
Aip02g02879 524 PANTHER SODIUM/HYDROGEN EXCHANGER 10 520 - -
Aip02g02879 524 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 27 447 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02879 Aip-Chr2 105047812 105053342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02879 18 522 Antiporters AT3G05030 67.681 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02879 - K14724 qsu:112020558 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02879 02 105047812 105053342 Aip02g02879 02 105047812 105053342 ECH