Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip02g02858 | ATGAAGGAAAAAGTGGATTCACCAGTTACAGTTCTTGAGGACTATTTCAGGTCCTCAGATTCATCAGAAACAAGTTGTTCAAAAGATCATGATCATAGTGGTTTGGATTCTGAGTCTCAAGAAATTTCAAGGCCAAGTTGTTCAAGGTGGCATTCGTTTGTTCAAATTTTGAAGGGAAAATCATCATCCAAGAACAACACATTGTTGCACCCTTTGAACATATCAAGAAGAATGAGTAGTAGCATGAGAGAGTCTCTATGGCCAAGTTGCCTCTTAGATGTTGCAAGCCCTTCACCTTGTAGGTCACCTTGGAAGATCTTCTCTCACCATGATATTCAACTAGCAACCAATCATTTCAGCCAAGAAAACTTGATTGGAAAAGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTACCAAATAATCAGGTTGTAGCAATTAAGAGGCTAACAAGAGGAACTGCTGATGAGATCATAGGTGACTTTTTATCAGAACTTGGAGTTATGGCACATGTCAATCACCCCAACACTGCTAAGCTTGTTGGTTATGGTGTGGATGGTGGAATGCACCTTGTTCTTGAATTGTCTGAGAAAGGGAGCTTAGCTTCACTGCTTTATGGTTCGAAGGAGAAATTAGCATGGTGCATGAGGCAAAAAATTGCAGTAGGAACAGCAAAGGGTATATTATATCTTCATGAGGGTTGTCAAAGAAGAATAATTCATAGAGATATAAAAGCTGCAAATATATTGCTCACTGAGGACTATGAGCCTCAGATATGTGATTTTGGGCTAGCAAAATGGCTACCGCAGAATTGGACTCACCACACTGTTTCGAAATTTGAAGGAACTTTTGGGTACCTTGCACCTGAGTACTTGCTTCATGGAATTGTTGATGAGAAAACAGATGTATTTGCTTTTGGTGTGCTTCTATTAGAATTGGTCAGTGGAAGGCGTGCACTTGATTATTCACAACAAAGCCTTGTTTTGTGGGCAAAACCATTGCTGAGAAAGAATGAAATTAAGGAGCTGATTGATCCATCACTAGATGAAGAATTTGACACAAGGGAGTTGAATCTCATGTTATTGGCAGCTTCTTTGTGCATTCAACAATCTTCAATTCGTCGCCCCTCTATCAGACAGGTTGTTCAACTTTTAAATGGAAATCTCAGCTGCTTTAAGGGCATGAAGAAAACTAGATTTCCATTCTTCAGAAAAGTCTTCCAAGAAGAACTCCTTGATTCTGAATAA | 1245 | 0.3944 | MKEKVDSPVTVLEDYFRSSDSSETSCSKDHDHSGLDSESQEISRPSCSRWHSFVQILKGKSSSKNNTLLHPLNISRRMSSSMRESLWPSCLLDVASPSPCRSPWKIFSHHDIQLATNHFSQENLIGKGGYAEVYKGCLPNNQVVAIKRLTRGTADEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMHLVLELSEKGSLASLLYGSKEKLAWCMRQKIAVGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQICDFGLAKWLPQNWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVSGRRALDYSQQSLVLWAKPLLRKNEIKELIDPSLDEEFDTRELNLMLLAASLCIQQSSIRRPSIRQVVQLLNGNLSCFKGMKKTRFPFFRKVFQEELLDSE | 414 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip02g02858 | 414 | PANTHER | PROTEIN KINASE FAMILY PROTEIN | 1 | 413 | - | - | |
Aip02g02858 | 414 | MobiDBLite | consensus disorder prediction | 16 | 40 | - | - | |
Aip02g02858 | 414 | SMART | serkin_6 | 119 | 391 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip02g02858 | 414 | Pfam | Protein kinase domain | 120 | 382 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip02g02858 | 414 | Gene3D | Transferase(Phosphotransferase) domain 1 | 196 | 397 | - | - | |
Aip02g02858 | 414 | ProSitePatterns | Protein kinases ATP-binding region signature. | 125 | 147 | IPR017441 | GO:0005524 | |
Aip02g02858 | 414 | SUPERFAMILY | Protein kinase-like (PK-like) | 96 | 384 | IPR011009 | - | |
Aip02g02858 | 414 | PANTHER | OS08G0249100 PROTEIN | 1 | 413 | - | - | |
Aip02g02858 | 414 | MobiDBLite | consensus disorder prediction | 23 | 38 | - | - | |
Aip02g02858 | 414 | ProSiteProfiles | Protein kinase domain profile. | 119 | 402 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip02g02858 | 414 | Gene3D | Phosphorylase Kinase; domain 1 | 93 | 193 | - | - | |
Aip02g02858 | 414 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 238 | 250 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip02g02858 | Aip-Chr2 | 104747761 | 104752240 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip02g02858 | 106 | 380 | Trihelix Transcription Factor Family | AT1G68690 | 41.958 | 3.34e-67 | 224 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Aip02g02858 | Pkinase | 9.3e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip02g02858 | - | - | gmx:100780587 | 683.715 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip02g02858 | 02 | 104747761 | 104752240 | Aip06g00988 | 06 | 14099150 | 14104645 | ECH | |
Aip02g02858 | 02 | 104747761 | 104752240 | Aip09g01780 | 09 | 46316632 | 46329931 | ECH | |
Aip02g02858 | 02 | 104747761 | 104752240 | Aip02g02858 | 02 | 104747761 | 104752240 | ECH | |
Aip06g00262 | 06 | 3061699 | 3063751 | Aip02g02858 | 02 | 104747761 | 104752240 | ECH | |
Aip01g02745 | 01 | 128843413 | 128846134 | Aip02g02858 | 02 | 104747761 | 104752240 | ECH | |
Aip04g00388 | 04 | 4666397 | 4669283 | Aip02g02858 | 02 | 104747761 | 104752240 | ECH | |
Aip06g00262 | 06 | 3061699 | 3063751 | Aip02g02858 | 02 | 104747761 | 104752240 | PCT |