Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02856 ATGACCATTTTACCCCTCTTCCTTTTCTTCTTCTTTCTCCCACTACCATCCCTCTCCCAACAACCGCCACCACCACCACCACCCTCATCATCATCATGCCCTCTTAACTTCACCATCCTCTACACCCTCACCGGCACCGGAAACACCCCAACCTCTTACTCCGCCGCCTCCGGAACCACGGTCACAAACACCAAGTGCCAGTTCATCCGCCAATCCTTCCGCCTCCTCCAGTCCGACCTCCTCCGCCGCACCGACAACTTCATGCCACCCCTCTCCGCCTCCGTCTCGTGCTGGTCCAACTTCCAATCCTACATCAACTCCTTCGACCCCACCTTCCATATTCAATCCTCATGCGGATTCTCCAACGCTTCAATTTCCCAAGGTTGCGTCAACATCACCACAAGGCAACGCTTTGAATCGTTGGTATCCTCTTCCGTGCTTCAAAATGTGGATACTAGTTGTAACCAGTCCCTTGAGAATAACTCGCCATGCGCACTCTGCACTACAAGCTTGTCTTCTTTACCAGCTTCTGGTAAATATCTTGGGAACCTCAGTGATTGCACTTCTCTGCCTTCTGTTTATGCTGCTGCTTTTAGCAACGCTTTTGGCCCTTCTGACCCTGGCACTGCAAAGTGCTTGTTCTCCCTTGATTTCACGCCTTTCGGCGATTCTAACAACAAGAAGAACAAGAAGAAGATTGTTGTTTCTGTCGTTGTCACCTTTATTTCTGTTTCGGGTTTGGTTTTCGTGGCTTTGGGATTGTGGAAGTTGAATGAAAAGTTGAGTGGTAAAAATGTTAGTGTTGCTGAAATGGGTTTGGTTTCTTCTTCAAGTGTTATGTGTTTGGATTATTCTTCTATGGATCAGAGCACTACTTTGATAAGATTCAGTATTGAGGATATTAAGAAAGCTACTAAGAATTTCTCAAGAGATAACATAATTGGAAGAGGAGGTTATGGCAACGTTTACAAAGGGTTGCTAAATGATGGAACTGAGGTTGCATTGAAGAGGTTCAAGAACTGTTCTGCTGCTGGTGATTCCAGCTTCAAGCATGAGGTTGAGGTTATTGCAAGTGTTAGACATGTGAATCTTGTTGCATTAAGAGGATATTGCAGTGCCACAACAAATTTAGAAGGGTACCAAAGAATCATTGTTTGTGATTTAATGAAAAATGGTAGCCTTCATGACCATTTATTTGGCGGCGGTTCTTCTTCAATTGGGCTTAATAATAAGCTTAGTTGGCCAATTAGGCAAAAGATTGCACTAGGAACTGCTAGAGGAATTGCTTATTTGCATTATGGTGCTCAACCTTCCATAATTCATAGAGATATCAAAGCAAGTAACATTCTTTTAGACGAAAAATTCGAGGCTAAGGTAGCCGATTTCGGTCTTGCAAAGTTTAATCCTGAAGGTATGACACATATGAGCACAAGGGTAGCAGGAACAATGGGTTATGTGGCTCCGGAATATGCTTTGTATGGTCAATTAACAGAGAGAAGTGATGTTTTCAGCTTTGGTGTTGTGCTTCTTGAGCTTCTAAGTGGAAAAAAAGCACTTTCAATGAGCAATGACGGTCAACCTTCTGCGTTGACCGATTGGGCATGGTCAATGGTTAGATCAAACAAGGCCTTAGATGTGATTGAAGATGGAATGCCTGAACTTGGGTCACCCAAGATTCTTGAGAAATATGTTTTGATTGGTGTGCTCTGTTCTCATCCTCAATTGTATGCTAGGCCTACTATGGATCAAGTTGTTAAGATGATGGAAACGGATCAAGATGTTGAAGATAATGAGGAGAACATGGTGCCGGCTATACCGGATCGGCCGATCCCTCTGGTGGCCGGAAGGCTTGATATCGAGAGATCGGCCAGTAGTAGTGGCGGCGGCGGCGGCTCTGGTGGACTATCTAGTCCTACAGGGTACCAAGCTTATACAATTGGAAGTGATAAGCATTCTTCTAATAACTCTAAGGAAGATGGAAGTTCAAGCTCCAAGATTTTGAGTATAGAAGAATGA 2016 0.4435 MTILPLFLFFFFLPLPSLSQQPPPPPPPSSSSCPLNFTILYTLTGTGNTPTSYSAASGTTVTNTKCQFIRQSFRLLQSDLLRRTDNFMPPLSASVSCWSNFQSYINSFDPTFHIQSSCGFSNASISQGCVNITTRQRFESLVSSSVLQNVDTSCNQSLENNSPCALCTTSLSSLPASGKYLGNLSDCTSLPSVYAAAFSNAFGPSDPGTAKCLFSLDFTPFGDSNNKKNKKKIVVSVVVTFISVSGLVFVALGLWKLNEKLSGKNVSVAEMGLVSSSSVMCLDYSSMDQSTTLIRFSIEDIKKATKNFSRDNIIGRGGYGNVYKGLLNDGTEVALKRFKNCSAAGDSSFKHEVEVIASVRHVNLVALRGYCSATTNLEGYQRIIVCDLMKNGSLHDHLFGGGSSSIGLNNKLSWPIRQKIALGTARGIAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALSMSNDGQPSALTDWAWSMVRSNKALDVIEDGMPELGSPKILEKYVLIGVLCSHPQLYARPTMDQVVKMMETDQDVEDNEENMVPAIPDRPIPLVAGRLDIERSASSSGGGGGSGGLSSPTGYQAYTIGSDKHSSNNSKEDGSSSSKILSIEE 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02856 671 Pfam Protein kinase domain 309 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02856 671 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 30 653 - -
Aip02g02856 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Aip02g02856 671 SMART serkin_6 308 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02856 671 MobiDBLite consensus disorder prediction 625 671 - -
Aip02g02856 671 SUPERFAMILY Protein kinase-like (PK-like) 287 589 IPR011009 -
Aip02g02856 671 ProSiteProfiles Protein kinase domain profile. 308 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02856 671 Gene3D Transferase(Phosphotransferase) domain 1 389 605 - -
Aip02g02856 671 Gene3D Phosphorylase Kinase; domain 1 274 387 - -
Aip02g02856 671 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Aip02g02856 671 MobiDBLite consensus disorder prediction 620 671 - -
Aip02g02856 671 Pfam SPARK 29 176 IPR043891 -
Aip02g02856 671 CDD STKc_IRAK 314 589 - -
Aip02g02856 671 PANTHER OS01G0253100 PROTEIN 30 653 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02856 Aip-Chr2 104672919 104674934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02856 30 656 Receptor kinase-like Gene Family AT2G48010 59.874 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip02g02856 Pkinase 1.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02856 - - gmx:100800760 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02856 02 104672919 104674934 Aip02g02856 02 104672919 104674934 ECH
Aip06g00261 06 3054944 3057297 Aip02g02856 02 104672919 104674934 ECH