Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02842 ATGGAGTTCAACCGTATCTTCGACAGTGAGGGTCAAGACTCGGATGGGGACAGTTCAGATGATTGTTCTGGACATTATCATGGTACTGACGAAGAATACGATGAAGAGGAGGGTTTTGAGGCCCAATGTGGTCCCAAAGCGAGGGAAAAAGGTGTTGGTGATGGGGTCAATTGTAGGGGGTCTGGCAGTGCAAGTGAGGAGGCAGGCGGCATGCCAAGCCGGCAAGTCTTCGCGGATGACTTCCTGGGCAGAGAGTTTGCAACCGAGGAGGATGCTTACGCTGCGTACAAGGAGTTTGCCAGAGTCAGGGGTTTTGGAGTTCGGAAGGGAGATGTAGCTCGGGTTAATGGGGTTTTGGTCAGAAGAGACTTTTTTTGCCATCGACAAGGGACAAGACATCCCAAGCACTACGACCGTCCTGAGCGAGTAAGGGAGGAGAGGCTCGAGAGCCGGACGGATTGTAAGGCAAAGTTAAAGATTTACTACGATGTGCAACACAGCGTTTGGAAGGTGAGAACCATCATGGACGAGCACAACCACGAGCTTGCCCCGGCGATGTTCACACATCTCCTCCCCAGTCACCGGAAGATGAGTGACGGCGATAAGGCACAAGTGGATAGTTTCAAACAGTTTGGGATTGCAACATCAAAAATAATGGCTTACATGGCTGGGCAGTCTGGTGGATATGGCATGCTTCGATTTACGAAGAGGAATTTGTATAATTATGTTCATCGGCAAAGGGTTGCGCGAATATGTGATGGTGATGCAGCAGCAACTATCAGTTACTTGGAAGGGAAGGCGAATGCAGACATGATGACGGTCGCACGCTACACACGGACTGAAGAGAATCGTTTGGGTAGCCTATTTTGGGTGGATGGTGAGATGATGTCGGATTATCAGGTCTTTGGTGATGTCCTGGCATTTGATTCCACGTATCGTTCTAACAAGTACAGGAAGCCGCTGGTGGTTTTCTCTGGTTCAAACCACCACAGACAGACATGCATATTCGGGTTCGCGCTACTGGAGGATGAAGAGGTTCGAACTTACCGGTGGGTGTTGTTGAACCTGTTGGATGTTATGGGACAGAAGAAGCACTGTGTAGTGGTGACGGATGGGGACAAGGCGATGCGTACTGCAATTGCGGAGGTGATGCCAAGCGCGACGCATAGGCTGTGCGGGTGGCACCTGGAGAAGAACTGCGTTCAAAGGGTTAAGGACACAGAATTCCGCAAGGTTTTTAAGAAAGCTTTGTATGCAAATTTTGAAATCGACGACTTTGAGGAGTATTGGAAGACATCGGTTGAGTCGCTCGGCCTACTTGATAATATTTGGGTTCAAAGCACATATGAAACCAGAGAAAGCTGGGCAACGGCCTACCTAAGGGGCACCTTCTGTGCGAGATACAGGACTACTTCAAGATGTGAAGGCATAAATGCTTTTATTAAGGGATTTCTTAAATCGACTGATAGCATTTTGGAGCTCGTACACAGTTTAGATCAGGTTGTAAAAGATTATCGTAATAATGAAGTAACAGCCCAATTCTATTCCACGTGTTATACTCCGGTGCTAACGACCGGCCTTGATTCGATCGAGCTGTTTGCCTCAAAGGTGTATACACGAGCAGTTTTCAGAGAAGTAAAGAAACAGATCAAGGGCGTTGCTACGTTACTGTTTCGGGGCAAGGATAGCATTTGCACCACTAGTGTATACCAATTTTTGAAGATGGGAAAACCTAAGAAAACACACAAGGTGTTGTATGATCCGAACGAGGAAAAGATTGAGTGTGAGTGTTCAATGTGGAACAGTGAGGGAATTCCATGTAGTCACATCTTCTGTGTGATGAAGTACGAGGGTTTGGAACAAATCCCGGAGAGCCTTATTTTGAGCAGGTGGTGCAAGGATGCAAAGGACTGGCGGTCGAAACCATCCCAAGTTACAGATAGCCATCAAGGACGCTTGCTTCGATATGGTGCCCTTACCGGGCTGATGAGTTTGGTTGCTAAACTTGGCTCTGAAGATGCCGAGGAGTTTGTGGTGGCTAGGGATGGCATTGCCAACCTCGCGGAGGAACTTCAACGAAGAGCGTACGATCGGGTCGGAAGCCAACTTGGGCTGTCGTCGCTGTCGGCACTCAATGACCCACTGGTTGCAAAAACAAAGGGGGCTCCGAGAAAGGGCAAGGAACCGGAACCGGAACCGGGCACACAATCTGAGGTTCCAACGAAGCGACGACGTTGTACAAGCTGTGGGGTTCCTGGTCATACAAAAAGGACATGCAGCTGGCGTCGCGAGCATCGCGGGGCCGGCACTGAGGGTGGAAAGGTCCCAGGTTGCGTGGAGTGCTCCTCTGATGTCCGTAGTTTCCCGTCCGCAACTGCGAAGGTGTGGGAGGCGATTAATTCCGACACCGGCGACAACGGCCGCACCGCTCCAACCCGTGCTGAGGGTGCAGAAATGACGTCCAATCATGGCTGTAGTCGTACGGCTTGCAACCCCCTAATGGGTGTTGGGGGTGGGGGGACAAACATCTTTCTCGGCGGGCAACACATTGAACAGTTCTTTGCTTCGCAAGGTTGCTCGGTCAAAAAAGGAGAGTCTCATGGAACCGCTGCCAGCCCAAGTATGTCTAATCCGACAAGGCACACAAACGACGAACTGTTCGAGCATTGGCTTTCACAGAATGCTGCGGGAAGGCCCTCGTCCAGCAGAAGGCATGGGTGGACATAG 2727 0.5035 MEFNRIFDSEGQDSDGDSSDDCSGHYHGTDEEYDEEEGFEAQCGPKAREKGVGDGVNCRGSGSASEEAGGMPSRQVFADDFLGREFATEEDAYAAYKEFARVRGFGVRKGDVARVNGVLVRRDFFCHRQGTRHPKHYDRPERVREERLESRTDCKAKLKIYYDVQHSVWKVRTIMDEHNHELAPAMFTHLLPSHRKMSDGDKAQVDSFKQFGIATSKIMAYMAGQSGGYGMLRFTKRNLYNYVHRQRVARICDGDAAATISYLEGKANADMMTVARYTRTEENRLGSLFWVDGEMMSDYQVFGDVLAFDSTYRSNKYRKPLVVFSGSNHHRQTCIFGFALLEDEEVRTYRWVLLNLLDVMGQKKHCVVVTDGDKAMRTAIAEVMPSATHRLCGWHLEKNCVQRVKDTEFRKVFKKALYANFEIDDFEEYWKTSVESLGLLDNIWVQSTYETRESWATAYLRGTFCARYRTTSRCEGINAFIKGFLKSTDSILELVHSLDQVVKDYRNNEVTAQFYSTCYTPVLTTGLDSIELFASKVYTRAVFREVKKQIKGVATLLFRGKDSICTTSVYQFLKMGKPKKTHKVLYDPNEEKIECECSMWNSEGIPCSHIFCVMKYEGLEQIPESLILSRWCKDAKDWRSKPSQVTDSHQGRLLRYGALTGLMSLVAKLGSEDAEEFVVARDGIANLAEELQRRAYDRVGSQLGLSSLSALNDPLVAKTKGAPRKGKEPEPEPGTQSEVPTKRRRCTSCGVPGHTKRTCSWRREHRGAGTEGGKVPGCVECSSDVRSFPSATAKVWEAINSDTGDNGRTAPTRAEGAEMTSNHGCSRTACNPLMGVGGGGTNIFLGGQHIEQFFASQGCSVKKGESHGTAASPSMSNPTRHTNDELFEHWLSQNAAGRPSSSRRHGWT 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02842 908 MobiDBLite consensus disorder prediction 1 72 - -
Aip02g02842 908 MobiDBLite consensus disorder prediction 714 749 - -
Aip02g02842 908 Pfam SWIM zinc finger 583 610 IPR007527 GO:0008270
Aip02g02842 908 Pfam FAR1 DNA-binding domain 96 183 IPR004330 -
Aip02g02842 908 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 75 689 IPR031052 GO:0006355
Aip02g02842 908 MobiDBLite consensus disorder prediction 867 881 - -
Aip02g02842 908 SMART 26again6 593 620 IPR006564 GO:0008270
Aip02g02842 908 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 75 689 - -
Aip02g02842 908 ProSiteProfiles Zinc finger SWIM-type profile. 582 618 IPR007527 GO:0008270
Aip02g02842 908 Pfam MULE transposase domain 305 399 IPR018289 -
Aip02g02842 908 MobiDBLite consensus disorder prediction 862 883 - -
Aip02g02842 908 ProSiteProfiles Zinc finger CCHC-type profile. 744 759 IPR001878 GO:0003676|GO:0008270
Aip02g02842 908 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02842 Aip-Chr2 104491997 104495131 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g02842 MULE 1.1e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02842 - - ahf:112709549 1188.33