Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02841 ATGGCATCTTCTTCTTTCAATGTTCCTTTAATCAAACATGATCTCTTCATAAGCTTTAGAGGAGAAATTCGCACTTCTTTTCTTTGCCATTTGATAAAAAGATTGCGCGATGACAGAATCATTAGTTTCTTTGTTGACGAGGAAAATCTTGGTGCTGGAGATGAGATCTCATCCGCACTTCTTCAAGCAATTGAGGAATCTTCCATTTCATTGGTCATCTTCTCGAAAGATTATGCTTCTTCGAGATGGTGTATGGAGGAGCTTGTGAAGATTATTGAATGCAAAGAACAATATCAAAGGACTCTGGTACCTGTTTTTTACAATGTTGATCCTTCTCATGTAAGGCACCAGAAACGAACTTTTGAAGAGGCTTTTGATGTCCACACTGAGAAGTATAGAGAAAACATGGCAAAGGTGCAGAATTGGAGATCTGCATTAAGAAAGGCTGCTGATTTGTCTGGAATCCATTATCCATCAACCTTGATCAGAAATGAAGTTGAGCTCATTGAAAAAATTATTGAAGTTGTGAATGAGAAGTTGCCGCCTATTTGTCCAAATAAATCCAAAGGTGTTGTTGGAATTGATGAACAAGTTAAGTCTATTGAATCGTTATTGGCAAAAATGGAGCCGAATGAAGTTGGAATCCTTGGAATTTGGGGCATGGGCGGTATAGGTAAAACAACCATTGCTCAAGTTATATTCAATAAATATTCCTCACAGTATGAAGGTTGTTGCTTCTTGAAAAATGTCAGAGAAGAATCAGAAAGGCACGGTCTGGATTATTTGTATGAGCAACTCTTTTCTCAACTACTGAAGAAACAAAATCTCCTTGTGAAAGGTTCTGCCAATGCAATATCTGCCATTTACGAGAGAAGATTGAGTCAGAAAGAAGTTCTCATAGTACTTGACGATGTGGATACATCAGATATATTAGATTATCTAACTGGAGAACAAACCTGCTTGGCACCAGGTAGTAGGGTCATTGTAACAACCAGAGACAAGCAGATACTCATTGCTGCAAGAGCACATGGAATATATGAGGTCAAGCGATTGAGCTTTATGAGCTCCCTTGAGCTTTTTTGCATAAAAGCCTTTAACAAAAGCTATCCTGAAAATGGATATAAAAAGCTTTCACAAATGGCAGTTAATTATGCAAATGGCATTCCACTAGCCTTAAAAGTATTGGGTTCTTTTTTATGCTCAAAAAGTGCAGTAGTTTGGAAAAATGCACTAAAAAAACTCCAGAGTTGCCCTGATAAGAGGATTTTCAATGTGTTGAAATTGAGCTACGATGGATTAGATGATTCGGACAAGAGCATATTCCTTGACATTGCATACTTTTTCAAAGGAGAATGCAAAGATAATGTCACAAGATTTCTAGACTCATGTAGTTTCTATGCGGATGTTGGAATAGACAATCTTGAAAGTAAAGCTCTTATAACTATTTCCTACAATAGAATACAAATGCATGACTTGATACAGCAAATGGGTTGGGAAGTCGTTCGCCAAGAATCAAATAAAGATCCTACAGAGCTCACTCGAATAAATAAGCCTGAAGATTTTCACAATTTATTGAAAAATAGCAAAGGAACAAATTTAGTTGAAGGTATTATGATAGACTTGTCTCAAATTGGAGATCTACACTTCAATGCTGACACCTTTAAAAATATGCCTCAACTAAGGTTTCTTAAGTTTTATGCTCCATGGGATGAAAAACAGTTGAATGTGTACATTCCCATACCCCTGGAGCCGTTTTCTGCTAGACTCAAGTATTTGGAGTGGAATAGTTATCCTCTGAATTCTCTATCATCAATGTTTTCTGTGGAGCAGCTTGTTGAGCTTAGGATGCCAAACAGTCAAATTTCTAAACTTTGGGATGGAACGCAGGAACTTCCGAATTTGATAGTGCTTTACCTTTATGGATGTAAAAAGTTGGTAGAGCTTCCAGATTTTAGTAAAGCAACAAAGCTTAAAACCATAGATCTTTGGAATTGTGAAAAACTATGTCAACTTCATCCATCTATTTTGTCCATCCAAACTCTTGAGGAATTATATCTTACTGGTTGCACAAAATTGAAGTGTGTCAAAAGCAATTTGAAGTCTCTTAAAACATTTTATGCTTATAATTGTTTAAGCCTGGAGAAATTTTCAGTGTCATCAGAAAAACTGTCGGATTTGGATATCTCTTTCTGGAGAATTAAAAGTCTACCAAATGAAATACGTAGCTTTTTTTCTCTTGAGTATCTTTGTCTTAGTAATTGCAGAAAGCTAATTGATCTCCCACGCAACATCAAAGCTCAATCAAGGTTAAGGGCTCTTGACGTAAGTGGTTGTAGTAGTCTTCGTGCTATACCAGAACTTCCACCATCTATTGAAGAGCTTTATGCTGTTGATTGCACATCACTTGAAACAATATTCAATTTGAAGGCAGTATTTAGTTTGAATAGGAGAAAGATCTCATTTGCAAATTGTGTGAGATTGGAACAAGAGTCAGTGAATGATATTATGGAAGATGCTCATCTCACAATATTCAGAAATGTTTTATTGTTGTCAGCAGATCCAGATCAGATGATAAATTATTATTATTATCATAAAATGTTAGGTTGTGTTTGTTATCCTGGGTACAAAGTTCCAAAGTGGTTCGGATGTGAAACAAGAGGAGCATCCATAATAATTGAACTTCATCAACCTTACTACGAGTTGTTGGGTTTCTTCTTCTGTTGTGTTATTTCTCAAAACTTACCTTCTTATTATTTTGAAGAATTGGATCTTGTCAATATCAAGTGTGAATACCGCCACTTCGGAGATGGCGTAAAGGACACATTTGTAAGTAAAAATCTAAACTTTGTTTCTAAACGACGATGTAGCTGTGATCATGTTTTAATATGGACTGATCCATTTGGTAGTGAAAACATATTGGGTGAAATTGAGAGGTGCAGACTCAGAGGTGGCAGTGATGATGATGATAGCACTTGCAACCAAAAGATGTCATTCAGATTCAGTATTGATAGACCTAAGAGAGGGAAGAGAGTCCAAATAAGGAGAGAAAATGATGAAGATTGTTTTATCAAAGGGTGTGGGGTTATTCCAATGTATGCCTCAACTCTCTTGGATGCCATTCAAAATCTTGAATTGGAGTTCAACTTGAAGCCTCATCATAACCCCATCCCAGGGATAAATCTGGACGAAGTAAAAAGTATGATGATCCGGAAGAGCAAAGGAAAATCAAAACTCCACTGA 3240 0.3654 MASSSFNVPLIKHDLFISFRGEIRTSFLCHLIKRLRDDRIISFFVDEENLGAGDEISSALLQAIEESSISLVIFSKDYASSRWCMEELVKIIECKEQYQRTLVPVFYNVDPSHVRHQKRTFEEAFDVHTEKYRENMAKVQNWRSALRKAADLSGIHYPSTLIRNEVELIEKIIEVVNEKLPPICPNKSKGVVGIDEQVKSIESLLAKMEPNEVGILGIWGMGGIGKTTIAQVIFNKYSSQYEGCCFLKNVREESERHGLDYLYEQLFSQLLKKQNLLVKGSANAISAIYERRLSQKEVLIVLDDVDTSDILDYLTGEQTCLAPGSRVIVTTRDKQILIAARAHGIYEVKRLSFMSSLELFCIKAFNKSYPENGYKKLSQMAVNYANGIPLALKVLGSFLCSKSAVVWKNALKKLQSCPDKRIFNVLKLSYDGLDDSDKSIFLDIAYFFKGECKDNVTRFLDSCSFYADVGIDNLESKALITISYNRIQMHDLIQQMGWEVVRQESNKDPTELTRINKPEDFHNLLKNSKGTNLVEGIMIDLSQIGDLHFNADTFKNMPQLRFLKFYAPWDEKQLNVYIPIPLEPFSARLKYLEWNSYPLNSLSSMFSVEQLVELRMPNSQISKLWDGTQELPNLIVLYLYGCKKLVELPDFSKATKLKTIDLWNCEKLCQLHPSILSIQTLEELYLTGCTKLKCVKSNLKSLKTFYAYNCLSLEKFSVSSEKLSDLDISFWRIKSLPNEIRSFFSLEYLCLSNCRKLIDLPRNIKAQSRLRALDVSGCSSLRAIPELPPSIEELYAVDCTSLETIFNLKAVFSLNRRKISFANCVRLEQESVNDIMEDAHLTIFRNVLLLSADPDQMINYYYYHKMLGCVCYPGYKVPKWFGCETRGASIIIELHQPYYELLGFFFCCVISQNLPSYYFEELDLVNIKCEYRHFGDGVKDTFVSKNLNFVSKRRCSCDHVLIWTDPFGSENILGEIERCRLRGGSDDDDSTCNQKMSFRFSIDRPKRGKRVQIRRENDEDCFIKGCGVIPMYASTLLDAIQNLELEFNLKPHHNPIPGINLDEVKSMMIRKSKGKSKLH 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02841 1079 Gene3D - 11 179 IPR035897 -
Aip02g02841 1079 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 154 IPR035897 -
Aip02g02841 1079 SMART till_3 12 152 IPR000157 GO:0007165
Aip02g02841 1079 Gene3D Ribonuclease Inhibitor 700 838 IPR032675 -
Aip02g02841 1079 Gene3D Ribonuclease Inhibitor 518 699 IPR032675 -
Aip02g02841 1079 Pfam NB-ARC domain 197 420 IPR002182 GO:0043531
Aip02g02841 1079 Pfam TIR domain 12 186 IPR000157 GO:0007165
Aip02g02841 1079 Pfam C-JID domain 873 1030 IPR045344 -
Aip02g02841 1079 ProSiteProfiles TIR domain profile. 11 180 IPR000157 GO:0007165
Aip02g02841 1079 Pfam Leucine Rich Repeat 610 629 IPR011713 -
Aip02g02841 1079 Gene3D - 180 343 IPR027417 -
Aip02g02841 1079 SUPERFAMILY "Winged helix" DNA-binding domain 421 522 IPR036390 -
Aip02g02841 1079 SUPERFAMILY L domain-like 533 820 - -
Aip02g02841 1079 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 917 IPR044974 GO:0006952
Aip02g02841 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 444 IPR027417 -
Aip02g02841 1079 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 917 - -
Aip02g02841 1079 Gene3D - 351 434 IPR042197 -
Aip02g02841 1079 PRINTS Disease resistance protein signature 215 230 - -
Aip02g02841 1079 PRINTS Disease resistance protein signature 292 306 - -
Aip02g02841 1079 PRINTS Disease resistance protein signature 385 399 - -
Aip02g02841 1079 PRINTS Disease resistance protein signature 765 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02841 Aip-Chr2 104407908 104412828 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02841 61 798 WRKY Transcription Factor Family AT4G12020 32.380 2.18e-97 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02841 - - ahf:112728390 1202.58