Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02833 ATGGCATCTTCTTCTTTCGATGTTCCTTTAATCAAACATGATCTCTTCATAAGCTTTAGAGGAGAAATTCGCACTTCTTTTCTTTGCCATTTGATAAAAAGATTGCGCGATGACGGAATCATTCGTTTCTTTGTTGACGAGGAAAATCTTGGTGCTGGAGATGAGATCTCATCCGCACTTCTTCAAGCAATTGAGGAATCTTCCATTTCATTGGTCATCTTCTCGAAAGATTATGCTTCTTCGAGATGGTGTATGGAGGAGCTTGTGAAGATTATTGAATGCAAAGAACAATATCAAAGGACTCTGGTACCTGTTTTTTACAATGTTGATCCTTCTCATGTAAGGCACCAGAAACGAACTTTTGAAGAGGCTTTTGATGTCCACACTGAGAAGTATAGAGAAAACATGGCAAAGGTGCAGAATTGGAGATCTGCATTAAGAAAGGCTGCTGATTTGTCTGGAATCCATTATCCATCAACCTTGATCAGtaagtctaatactaacaaaaaTTTTCTAGTAGTGTATAATAAAGATCCTACAGAGCTCACTCGAATAAATAAGCCTGAAGATTTTCACAATTTATTGAAAAATAGCAAAGGAACAAATTTAGTTGAAGGTATTATGATAGACTTGTCTCAAATTGGAGATCTACACTTCAATGCTGACACCTTTAAAAATATGCCTCAACTAAGGTTTCTTAAGTTTTATGCTCCATGGGATGAAAAACAGTTGAATGTGTACATTCCCATACCCCTGGAGCCGTTTTCTGCTAGACTCAAGTATTTGGAGTGGAATAGTTATCCTCTGAATTCTCTATCATCAATGTTTTCTGTGGAGCAGCTTGTTGAGCTTAGGATGCCAAACAGTCAAATTTCTAAACTTTGGGATGGAACGCAGGAACTTCCGAATTTGATAGTGCTTTACCTTTATGGATGTAAAAAGTTGGTAGAGCTTCCAGATTTTAGTAAAGCAACAAAGCTTAAAACCATAGATCTTTGGAATTGTGAAAAACTATGTCAACTTCATCCATCTATTTTGTCCATCCAAACTCTTGAGGAATTATATCTTACTGGTTGCACAAAATTGAAGTGTGTCAAAAGCAATTTGAAGTCTCTTAAAACATTTTATGCGTATAATTGTTTAAGCCTGGAGAAATTTGCAGTGTCATCAGAAAAACTGTCGGATTTAGATATCTCTTTGTGGAGAATTAAAAGTCTACCAAATGAAATATGTAGCTTTTTTTCTCTTGAGTATCTTTGTCTTAGTAATTGCAGAAAGCTAATTGATCTCCCACGCAACATAAAAGCTCAATCAAGGTTAAGGGCTCTTGACGTAAGTGGTTGTAGTAGTCTTCGTGCTATACCAGAACTTCCACCATCTATTGAAGAGCTTTATGCTGTTGATTGCACATCACTTGAAACAATATTCAATTTGAAGGCAGTATTTAGTTTGAATAGGAGAAAGATCTCATTTGCAAATTGTGTGAGATTGGAACAAGAGTCAGTGAATGATATTATGGAAGATGCTCATCTCACAATATTCAGAAATGTTTTATTGTTGTCAGCAGATCCAGATCAGATGATAAATTATTATTATTATCATAAAATGTTAGGTTGTGTTTGTTATCCTGGGTACAAAGTTCCAAAGTGGTTCGGATGTGAAACAAGAGGAGCATCCATAATAATTGAACTTCATCAACCTTACTACGAGTTGTTGGGTTTCTTCTTCTGTTGTGTTATTTCTCAAAACTTACCTTCTTATTATTTTGAAGAATTGGATCTTGTCAATATCAAGTGTGAATACCGCCACTTCGGAGATGGCGTAAAGGACACATTTGTAAGTAAAAATCTAAACTTTGTTTCTAAACGACGATGTAGCTGTGATCATGTTTTAATATGGACTGATCCATTTGGTAGTGAAAACATATTGGGTGAAATTGAGAGGTGCAGACTCAGAGGTGGCAGTGATGATGATGATAGCACTTGCAACCAAAAGATGTCATTCAGATTCAGTATTGATAGACCTAAGAGAGGGAAGAGAGTCCAAATAAGGAGAGAAAATGATGAAGATTGTTTTATCAAAGGGTGTGGGGTTATTCCAATGTATGCCTCAACTCTCTTGGATGCCATTCAAAATCTTGAATTGGAGTTCAACTTGAAGCCTCATCATAACCCCATCCCAGGGATAAATCTGGACGAAGTAAGAAGTATGATGATCCGGAAGAGCAAAGGAAAATCAAAATTCCACTGA 2250 0.3613 MASSSFDVPLIKHDLFISFRGEIRTSFLCHLIKRLRDDGIIRFFVDEENLGAGDEISSALLQAIEESSISLVIFSKDYASSRWCMEELVKIIECKEQYQRTLVPVFYNVDPSHVRHQKRTFEEAFDVHTEKYRENMAKVQNWRSALRKAADLSGIHYPSTLISKSNTNKNFLVVYNKDPTELTRINKPEDFHNLLKNSKGTNLVEGIMIDLSQIGDLHFNADTFKNMPQLRFLKFYAPWDEKQLNVYIPIPLEPFSARLKYLEWNSYPLNSLSSMFSVEQLVELRMPNSQISKLWDGTQELPNLIVLYLYGCKKLVELPDFSKATKLKTIDLWNCEKLCQLHPSILSIQTLEELYLTGCTKLKCVKSNLKSLKTFYAYNCLSLEKFAVSSEKLSDLDISLWRIKSLPNEICSFFSLEYLCLSNCRKLIDLPRNIKAQSRLRALDVSGCSSLRAIPELPPSIEELYAVDCTSLETIFNLKAVFSLNRRKISFANCVRLEQESVNDIMEDAHLTIFRNVLLLSADPDQMINYYYYHKMLGCVCYPGYKVPKWFGCETRGASIIIELHQPYYELLGFFFCCVISQNLPSYYFEELDLVNIKCEYRHFGDGVKDTFVSKNLNFVSKRRCSCDHVLIWTDPFGSENILGEIERCRLRGGSDDDDSTCNQKMSFRFSIDRPKRGKRVQIRRENDEDCFIKGCGVIPMYASTLLDAIQNLELEFNLKPHHNPIPGINLDEVRSMMIRKSKGKSKFH 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02833 749 Pfam C-JID domain 543 702 IPR045344 -
Aip02g02833 749 Gene3D Ribonuclease Inhibitor 372 508 IPR032675 -
Aip02g02833 749 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 178 602 IPR044974 GO:0006952
Aip02g02833 749 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 138 IPR044974 GO:0006952
Aip02g02833 749 SUPERFAMILY L domain-like 203 490 - -
Aip02g02833 749 Pfam TIR domain 12 163 IPR000157 GO:0007165
Aip02g02833 749 Gene3D - 11 208 IPR035897 -
Aip02g02833 749 ProSiteProfiles TIR domain profile. 11 170 IPR000157 GO:0007165
Aip02g02833 749 Pfam Leucine Rich Repeat 280 299 IPR011713 -
Aip02g02833 749 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 178 602 - -
Aip02g02833 749 SMART till_3 12 152 IPR000157 GO:0007165
Aip02g02833 749 Gene3D Ribonuclease Inhibitor 255 371 IPR032675 -
Aip02g02833 749 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 138 - -
Aip02g02833 749 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02833 Aip-Chr2 104327632 104330577 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02833 179 468 WRKY Transcription Factor Family AT4G12020 32.500 6.44e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02833 - - aip:107626076 1117.45