Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02831 ATGCCCGCCGTCACCAGCACCACCCTTGCTGCACCGTTAGCCTCCCCTTCGCCTCGTCTCCTCGTCGCCGTTACCAGCATCCTTACCGTCAGCAGCGTCATTAGCCTCTCCTCTGCGTCGTCATCTCCATTACGCGCCAGCGTCATCGTTTCGCCTCCCTTGTCATTTCATCGCTCTCCTGCTATCTTCCTGTTCTTCTTAACAACCACTAACAATGCAATAACAGCACTGAAGCTATTAAGAGAAAAGAAGAACAAGTTTGAAGAGGTTCCGCTGTTTCAGCTTTGCTCCTTCGTCCCTGCTGGTGCCTTCGTCTCTACCATTCCCTACTCAGCCTTCTCTGCCATTGATCCCATCGTGCTCCCCACCGGTCCGCGCCAGCGCACCGCCGAGGAGCTTGACCGCGACCGCAACCGTCTTGGCAGCGGCTTCAGGAACTACGGCGATGACCGCGCCAACAGAAGCTTCGGTGATGGTGATGATTCCTCCAATTCAAGGTGGGGTTCCTCTAGGGTTTCTGACAAGCCGAGGCAGAACGGTGGGTTTAGGGATTCGAACCGTGAATTGGCTCCTTCCCGCGCTGACGAGATTGATAATTGGGCTGCCGCGAAGAAATCAACGGTCGGTAATGGTTTCAAGAGGAGGGAAAGGGATAGGGATATAGAAAGGAGCGGTTTTTTCGATTCCCAATTGCGTGCTGATGAATCCGATAGTTGGGTTACGAACAAGAGTTATGTGCCGTCAGAGAGTCGGAGATTTGGTTCCAACGGCGGTTTTGGTGGTCTTGGGTTTGAAAGAGAGAGGAAGGTAGGGTTTGGGTCTAGCGGCGGCGAAGATTCTGATAATTGGAACAAGAAAAAGGTTGAATTTAACGGTGAAAGTGAGAGGAGTGAGGGTGGTGGTGGGAGACCTAGGCTTGTTTTGCAACCTCGTACAACGCCTGTGAACAATGAGAGCCAGGAGGAATCGGACACCCTTCTGCCTCCTCTTCAAAACCCTGATGACAAAATCGAATCAAAGAACCCACATCCCATTCCCAACCCCATTATCATCAACAAAAAAGAAGGTGAAGTCTCAGAGGTAGTGTCTCAGCTCTCAGAAGAACCATGCAGCATCAGTGGAAGCTTCTCCACCGCTACCACAGTTACGGAGAAGAGAGAAAAAGAAGTAACCAGTAAAAGAAGCATCAGGGAGGGAACAACAACAATGATGAAGAATCATAAGTGGAACAGCAACAGATCCCCGTCGATGAAGCGCCCTCACGCCTGTGATGGCAATGTCGCCTCCGGGAGGGAGCGGAGTGTTGAGGAAGAAGGCACCAGAGTggGAATACCACTTCAGGCTACAGATTATCTGGAACAGGCCGAGCATGATACTGGCTTTAAAACTTTTCAGGATAAGCTGGATGAGTCAGCACACAAGGTATTAACTGATTATCAAGCTGCTACAGTGACTCTCTTAGCGCTATTATCAGCTGCACCTGGTGATATGCCTGGTTTGGAGCTTGGATTGTCGCAAAATAGACATATTGGGGTAATAAATCCACAGGTTTTGACTCAGATTTACCAGCAAATGGGTCAGGCTAGGGTGCACCAAGACCATTAA 1605 0.5034 MPAVTSTTLAAPLASPSPRLLVAVTSILTVSSVISLSSASSSPLRASVIVSPPLSFHRSPAIFLFFLTTTNNAITALKLLREKKNKFEEVPLFQLCSFVPAGAFVSTIPYSAFSAIDPIVLPTGPRQRTAEELDRDRNRLGSGFRNYGDDRANRSFGDGDDSSNSRWGSSRVSDKPRQNGGFRDSNRELAPSRADEIDNWAAAKKSTVGNGFKRRERDRDIERSGFFDSQLRADESDSWVTNKSYVPSESRRFGSNGGFGGLGFERERKVGFGSSGGEDSDNWNKKKVEFNGESERSEGGGGRPRLVLQPRTTPVNNESQEESDTLLPPLQNPDDKIESKNPHPIPNPIIINKKEGEVSEVVSQLSEEPCSISGSFSTATTVTEKREKEVTSKRSIREGTTTMMKNHKWNSNRSPSMKRPHACDGNVASGRERSVEEEGTRVGIPLQATDYLEQAEHDTGFKTFQDKLDESAHKVLTDYQAATVTLLALLSAAPGDMPGLELGLSQNRHIGVINPQVLTQIYQQMGQARVHQDH 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02831 534 Pfam Plant specific eukaryotic initiation factor 4B 116 319 IPR010433 GO:0003743
Aip02g02831 534 MobiDBLite consensus disorder prediction 290 347 - -
Aip02g02831 534 MobiDBLite consensus disorder prediction 396 417 - -
Aip02g02831 534 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 83 400 - -
Aip02g02831 534 MobiDBLite consensus disorder prediction 128 144 - -
Aip02g02831 534 MobiDBLite consensus disorder prediction 371 440 - -
Aip02g02831 534 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 83 400 IPR010433 GO:0003743
Aip02g02831 534 MobiDBLite consensus disorder prediction 310 327 - -
Aip02g02831 534 MobiDBLite consensus disorder prediction 127 190 - -
Aip02g02831 534 MobiDBLite consensus disorder prediction 158 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02831 Aip-Chr2 104290424 104294841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02831 119 315 Eukaryotic Initiation Factors Gene Family AT4G38710 46.262 1.69e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02831 - - ahf:112730620 520.39