Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02826 ATGGCTTCTTCTTCTTCTTCTTCTTTTTTATTGGATGCTCCCAGAATCAAACATGATGTCTTCATCAGCTTCAGAGGAGAAGATATCCGCACTTCTTTTCTTAGCCATTTGAGAAAAGAGTTGCATCGTTACCATATCGATTTCTTCGTGGACGACGAAAAACTGCACCCTGGAGATGAtatttcatccacgcttattcaagccattgaagagtcttgtatttccttggtcatcttttcggaaaactatgcttcttccacttggtgcttgaatgaacttgtgaaagtaattcaatgcatgaaacaagatcgaaggattgtgatacctgttttctacaacgttgttccctctgatgtgcggcatcagaataattcctttaaggaggcttttgataaacaccaacacagattgaagggaaatatgatgaaggtgcaaagttggagatttgctttaaaggaagcttctaatttatctggATTTCATTATCCATCAAAATATCAGGATGAATCTAAATTCATTGAAGAAATTGTGAATGATATTTCAGAGAAATTGTCATATATTTTCTCAATAGAATCCAAATGTCTTGTTGGAATTGATGATAATTTTACAAGTATTGAATCATTATTGGAAATTGAATCCGTCAAGgtccgaatcataggaatttgggggatgggaggaataggtaaaactactattgctgaattcttatttgacaaatattcttcccaatatgaaggcagttgtatgttgaaaaatgtaagagaagaatcacaaaagtttggtgtgccttatttatgtgagaaacttatttctgagttattagccggagaaagccttgttttgaaaggatcatccaaagcaagatccgcttttatccagagaaagttgagtcgaaaaaaagttttcatagtgcttgatgatatggatacattagaacagtttgaacatcttgctacaaaatggttgggaccaggtagtaggatcattataactaccagagacaagcatgtccttagaaaagttcatggaatatatgaagtccagggcttgagctttaaaaattcccttaagctattttgcttgaatgcttttgacaaagtctatcctgaaactggatatgaagagttttctgaaatagcagtcaattatgcaaatggcgtcccattggctttacgagttttgggttcttttttatactctaaaaccatagaagaatgggaaagtgctttgggaaaactcaagatttatcctaatatagacatttttaatgtcttaaaattgagttatgatgggctagatgatttagagaaggacatattccttgacattgcattttttttcaaaggagaagataaggatgttgtcatatcatttctagaatcctgtggtttttttcctgctattggcataggcaacctttcacgtaaagctctcataactatttcaaatcgtaatacaatagaaatgcatgatttgatagggcaaatgggtcgagaaatagttcgtcaagaatcaattaaagacccaggaagacgtagccgcttaagtaaccatgaggatgtctacaatgtactgaacaataataagGGAACAGACTCAGTTGAAGGCATTATGTTGGACTTGTCTCAAATTAAAAGAGATCTACATTTAGATGCCGACACTTTTAAAAGGATGCCTAATATAAGGTTTCTTAAATTTTATGATTCATGGAGGCAAAAAGAATCAGCAAATGTGCACGTTTCTTCAACTTTTGATTCATTTCCAAAGGAACTAAGATACTTGGAGTGGAGTGGCTGCCCTGTGAAGTCTCTTCCGCCAAATATTTGTGCTGAGAAGCTTGTTAAGCTTTCTATGCCAGATAGCCAAGTTTCTAAACTTTGGGATGGAGTTCAGGATCTTGTAAATTTAAAGAAGATTAACCTTAGGGGATGCAAGCAGCTAGTGGAGCTTCCAGATTTTTCTCGTGCATCAAACCTTGAAGAAATATGCCTCATTGAATGCGTAAGGTTGTTTGAACTTCATCCATCCATTTTATCCATCCACAAGCTCGAAAATTTAAGTGTTTGGGGTTGCAAAGCACTAAAGAGTCTTAAAAGCAATATCCATTTAAAATCTCTTAAAAAACTCGATGTTCGTTGCTGCTCAAGCATGAAGGAATTTTCAGTGTCATCAGAGGAATTAATGAGCTTGAATTTCAATGGGACAATAATTGAAATGTTGCAATCATCAGTTGGCCGTCTCAGCAAACTTGTAGAGTGTGATCTGAGTAATGTGAGACTTGAAACTCTTCCAAACGAGCTGTGTCTCTTAGTATCCCTTGAGAAACTAAATCTTGAAGGATGCAAACAGTTGATTGAACTCCCTCACAATATGAAAGCCCTGTCGCGGTTACAGGATCTCAACATAACAGGTTGCTGCAGCCTTGGATCTTTACCGGAGCTTCCACCGTCTCTTATACATTTATCTGCCACAAACTGCAGATCGCTGGAGAAATTGTTCAATATAAAGACACTATTCAGTTTAAATCTAAAATCCATCTCATTTGAAAACTGCGAGAGGCTTGATGAGCATTCATTCTTAGAATATGTGCATCTTACAATGATGGGAGTAGCAATTAGAGATATATTGGCTGACATGCTGCAATACAAAATTGAACCTCATGCTGATGATGACGATACTACGTTCTTCCCTGAATCCAACAATCAGGTTTTTTATCCCGGAAGCAAGGTTCCACCATGGTTCATATATCAGACAAGAGAGGCTTCAGTAACTATTGACCTTCCTGCAGATCAACCATTGAACCAGCTAGTTGGTTTCATTCTCTGTTGTGTTGTTTATCATATTCCTTCCCATATAGAGTCTCCCACCACTAGTCGTGCTTTTTATTCAAAACGGCCTCCCAAAATCCGTTGTCAATACAGTGGTTTTGGGTATAGCAAACAGTTTGCTAAAACGAGTCGATGGAACTCAGATCATGTTTGCATATGGTTTCATGCTGCTCATAATCGTCAATGGCATGGCAACAATGCCACATTTAAATTCAAAGCTGAAACTCTATCTGAATTCAAAGTTGAAACTCGATGTGAAGATTATACGCCATGGAATAAACGTATCCCATATGTATGGAGGGTCATAGAGGAATGGGAGGTCATAGGGTGTGGGGTTTACCCAATATATGCCTCAGACATCCTAGATGTCTTTCAAAAAGTGGATCCTCAGTTCCAGTTTTTTAAAGATAGAAGCAGTTGGGAACGGAAATCTGGGATTGGGAGGACTGATCTTCAATCGGTTTACACTCTCGAGGAAGTCAAGACAAGGATGATTCACAAGATGGAAGCAGACCAAAAAAGGTTCTCATCGGTTTCCAGGATTTGTCGAATTTCTAATAACAGGACCAGGATGTCAATGGTTTCCTTAAAACCAAAAGAAGTATCTCAACGCTTGAATGAAGAAGAAAACCAAGTCGATCAGAGAAACAGTTCTCCATTACCTTGGCGTTTGGTAACAAAGATGTTTAAGTGCTTGTATGGGTGCTGTTAA 3540 0.2511 MASSSSSSFLLDAPRIKHDVFISFRGEDIRTSFLSHLRKELHRYHIDFFVDDEKLHPGDDISSTLIQAIEESCISLVIFSENYASSTWCLNELVKVIQCMKQDRRIVIPVFYNVVPSDVRHQNNSFKEAFDKHQHRLKGNMMKVQSWRFALKEASNLSGFHYPSKYQDESKFIEEIVNDISEKLSYIFSIESKCLVGIDDNFTSIESLLEIESVKVRIIGIWGMGGIGKTTIAEFLFDKYSSQYEGSCMLKNVREESQKFGVPYLCEKLISELLAGESLVLKGSSKARSAFIQRKLSRKKVFIVLDDMDTLEQFEHLATKWLGPGSRIIITTRDKHVLRKVHGIYEVQGLSFKNSLKLFCLNAFDKVYPETGYEEFSEIAVNYANGVPLALRVLGSFLYSKTIEEWESALGKLKIYPNIDIFNVLKLSYDGLDDLEKDIFLDIAFFFKGEDKDVVISFLESCGFFPAIGIGNLSRKALITISNRNTIEMHDLIGQMGREIVRQESIKDPGRRSRLSNHEDVYNVLNNNKGTDSVEGIMLDLSQIKRDLHLDADTFKRMPNIRFLKFYDSWRQKESANVHVSSTFDSFPKELRYLEWSGCPVKSLPPNICAEKLVKLSMPDSQVSKLWDGVQDLVNLKKINLRGCKQLVELPDFSRASNLEEICLIECVRLFELHPSILSIHKLENLSVWGCKALKSLKSNIHLKSLKKLDVRCCSSMKEFSVSSEELMSLNFNGTIIEMLQSSVGRLSKLVECDLSNVRLETLPNELCLLVSLEKLNLEGCKQLIELPHNMKALSRLQDLNITGCCSLGSLPELPPSLIHLSATNCRSLEKLFNIKTLFSLNLKSISFENCERLDEHSFLEYVHLTMMGVAIRDILADMLQYKIEPHADDDDTTFFPESNNQVFYPGSKVPPWFIYQTREASVTIDLPADQPLNQLVGFILCCVVYHIPSHIESPTTSRAFYSKRPPKIRCQYSGFGYSKQFAKTSRWNSDHVCIWFHAAHNRQWHGNNATFKFKAETLSEFKVETRCEDYTPWNKRIPYVWRVIEEWEVIGCGVYPIYASDILDVFQKVDPQFQFFKDRSSWERKSGIGRTDLQSVYTLEEVKTRMIHKMEADQKRFSSVSRICRISNNRTRMSMVSLKPKEVSQRLNEEENQVDQRNSSPLPWRLVTKMFKCLYGCC 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02826 1179 Pfam Leucine Rich Repeat 612 631 IPR011713 -
Aip02g02826 1179 SUPERFAMILY "Winged helix" DNA-binding domain 420 525 IPR036390 -
Aip02g02826 1179 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Aip02g02826 1179 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
Aip02g02826 1179 Gene3D - 13 187 IPR035897 -
Aip02g02826 1179 Gene3D Ribonuclease Inhibitor 719 881 IPR032675 -
Aip02g02826 1179 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1025 IPR044974 GO:0006952
Aip02g02826 1179 Gene3D - 188 346 IPR027417 -
Aip02g02826 1179 PRINTS Disease resistance protein signature 218 233 - -
Aip02g02826 1179 PRINTS Disease resistance protein signature 295 309 - -
Aip02g02826 1179 PRINTS Disease resistance protein signature 384 398 - -
Aip02g02826 1179 PRINTS Disease resistance protein signature 701 717 - -
Aip02g02826 1179 SMART till_3 17 157 IPR000157 GO:0007165
Aip02g02826 1179 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 1025 - -
Aip02g02826 1179 Pfam TIR domain 17 190 IPR000157 GO:0007165
Aip02g02826 1179 Pfam NB-ARC domain 205 414 IPR002182 GO:0043531
Aip02g02826 1179 Gene3D Ribonuclease Inhibitor 525 718 IPR032675 -
Aip02g02826 1179 SUPERFAMILY L domain-like 549 860 - -
Aip02g02826 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 443 IPR027417 -
Aip02g02826 1179 Pfam C-JID domain 905 1062 IPR045344 -
Aip02g02826 1179 Gene3D - 350 433 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02826 Aip-Chr2 104254992 104258915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02826 18 823 WRKY Transcription Factor Family AT4G12020 35.000 9.37e-113 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02826 - - ahf:112728432 2358.18