Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02822 ATGGGGAGTTCAGGTACGAACTTGGTGACTACAATAATTGGTTTTGGATTGAGTGCAACATTCATAGTGTTTGTGTGCACAAGAATCATTTGTGGGAGAATTCAAAGGTATATAGCATCATCATCATCTTCATCATCAAGGACTATATATGAATTTCAATCAAGACCAGACATAGAACGGGGAGAACATGATGTTGTTGAGGGAGTACCTGCTTTTGTTTCTGCAATCCCCACTTTAAAGTTCAACAAAGAGGCTTTCAGCTCCGTTGAATGTACACAGTGTGTGATATGTTTGGGAGATTACAAAGAGCAAGAATTGTTGAGGATCATACCAAAATGTGGGCACTGTTTTCATGTCTCTTGCATTGATATGTGGCTAAGAAAGCAATCTACATGCCCTGTATGCCGTTTGCCACTTAGAAATGCTCTTGAACAAAAGAATGTGACAAGTGTGGCATTCACAATAAGCCACCACCACTCTCTTCATGATGAGTCTAATGCTTCATTACAAAGGAACATTAGTGATGATGAGAGGCCAGTAGTTGATTCTAATTCTAGTAACACCTCACTTCCAATTTCTGTAGGAGAACCTGAAATAAGACCCTGA 606 0.396 MGSSGTNLVTTIIGFGLSATFIVFVCTRIICGRIQRYIASSSSSSSRTIYEFQSRPDIERGEHDVVEGVPAFVSAIPTLKFNKEAFSSVECTQCVICLGDYKEQELLRIIPKCGHCFHVSCIDMWLRKQSTCPVCRLPLRNALEQKNVTSVAFTISHHHSLHDESNASLQRNISDDERPVVDSNSSNTSLPISVGEPEIRP 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02822 201 MobiDBLite consensus disorder prediction 179 193 - -
Aip02g02822 201 Pfam Ring finger domain 93 136 IPR001841 -
Aip02g02822 201 CDD RING-H2_EL5_like 93 136 - -
Aip02g02822 201 SUPERFAMILY RING/U-box 93 146 - -
Aip02g02822 201 MobiDBLite consensus disorder prediction 177 201 - -
Aip02g02822 201 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Aip02g02822 201 SMART ring_2 94 135 IPR001841 -
Aip02g02822 201 PANTHER OS11G0150450 PROTEIN 1 177 - -
Aip02g02822 201 PANTHER OS02G0676500 PROTEIN 1 177 - -
Aip02g02822 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 146 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02822 Aip-Chr2 104221221 104222901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02822 83 139 C3H Transcription Factor Family AT4G10160 56.140 2.55e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02822 - - adu:107475875 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02822 02 104221221 104222901 Aip02g02822 02 104221221 104222901 ECH