Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02817 ATGGTGGAAGATTATGGTGCTGCTGCTGCATCATTTGATGCTAGTTCAACAGAAGAATGGTTGCTTCATGCACAAAAGCTTGTTCCTGCAGCAATGTCTAAAGCAAAAGAGGTTAAAGTTTTCCCAGTCAAGTGGAAGATGATTATCTCGAAATTGGAGCAGATTCCGTCGCGTTTATCGGACTTGTCGAGCCACCCTTGCTTCTCCAAGAATGCTCTCTGCAAGGAGCAATTGCAGTCAGTTTCCAAGTCACTCGAAGAAGCTATCGAATTGGCCGAGCTTTGTTTGAAGGAGAAGTATGAAGGTAAGCTTCGGATGCAGAGTGATCTCGACGCTTTAGCTGGGAAACTCGATTTAAATTTGAAAGATTGCAGCTTGCTCATCAAAACCGGTGTGCTAGGAGAGGCTACTCTGCCTTTGATGGTGTCTGGTTCTGTTCAAGACTCTGATGTAGATTTTGCATCCATTAAGGAATTACTTGCAAGGCTTCAGATAGGTAACTTGGAAGCCAAGCAAAGAGCATTGGAGAAGCTCTATGATGTGATGAAAGAAGATGAGAAGAATGTTTTGGCTGTTCTTGGGAGAAGCAATGTTGCTGCATTGGTTCAATTGCTTACAGCAACATCTCCAAGGATTAGGGAAAAGGCTGCTACTGTGATATGTATTCTTGTGGAATCTGGGGACTCTGTTTCTCAGGCTGCAGCCGCTTGTGCTTTGAAGAATGCGTCGTCCGTGCCGGATGTGAGGCAGGTTTTGGCTGAAGAAGGCATTGTGAAAGTGATGATTGAGCTCCTTAGCTCTGGAATTTTGTTGGGAACGAAAGAGTATGCGGCCGAGTGCTTGCAGAATCTAACAGCGAGCAACGAGAATCTAAGAAGATCTGTCATAGCAGAAGGTGGTTTCAGCAATCTCCTGGCCTATCTTGATGGCCCTCTTCCTCAAGAATCCGCGGTCGCAGCCCTGAGGAATTTGGTTGGTTCTGTTTCTGAGGATGTTCTGGATTCCCTCGGCTTGCTTCCTCGATTGGTTCACGTGCTTAAGTCGGGTTCCTTGGGAGCCAAGCAAGCTGCAGCCTCTGTCATTTGCCGGATTTGTGGCCCGGTTGAGATGAAAAAAATGATCGGCGAAGCCGGCTGCATACCTCTTCTGATAAATTTGCTTGAGGCTAAAGCAAATAGTGCTAGAGAAGCTGCATCACAAGCAATTTCGAGCTTGATGGTTCTGTCTGCGAATCGAAGAGAGGTTAAGAAGGATGATAAGATTGTGGTGCCAAGTTTGGTTCAGTTGCTTGATCCAAATCCACAGAACACTGCAAAGAAATATGCAGTTTCATGCCTTGCATCATTGTCTTCTTGCAAGAAATGTAAGAAGCTTATGATTTCTTATGGAGCAATAGGGTATCTCAAGAAGCTTAGTGAGATGGAGATTCCTGGATCTAAGAAGCTTCTAGAGAGATTGGAAAGAGGAAAACTCAGAAGCTTGTTTAGCAGAAAATAA 1497 0.4496 MVEDYGAAAASFDASSTEEWLLHAQKLVPAAMSKAKEVKVFPVKWKMIISKLEQIPSRLSDLSSHPCFSKNALCKEQLQSVSKSLEEAIELAELCLKEKYEGKLRMQSDLDALAGKLDLNLKDCSLLIKTGVLGEATLPLMVSGSVQDSDVDFASIKELLARLQIGNLEAKQRALEKLYDVMKEDEKNVLAVLGRSNVAALVQLLTATSPRIREKAATVICILVESGDSVSQAAAACALKNASSVPDVRQVLAEEGIVKVMIELLSSGILLGTKEYAAECLQNLTASNENLRRSVIAEGGFSNLLAYLDGPLPQESAVAALRNLVGSVSEDVLDSLGLLPRLVHVLKSGSLGAKQAAASVICRICGPVEMKKMIGEAGCIPLLINLLEAKANSAREAASQAISSLMVLSANRREVKKDDKIVVPSLVQLLDPNPQNTAKKYAVSCLASLSSCKKCKKLMISYGAIGYLKKLSEMEIPGSKKLLERLERGKLRSLFSRK 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02817 498 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 256 300 IPR000225 GO:0005515
Aip02g02817 498 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 227 - -
Aip02g02817 498 SUPERFAMILY ARM repeat 156 478 IPR016024 -
Aip02g02817 498 Coils Coil 165 188 - -
Aip02g02817 498 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 226 498 - -
Aip02g02817 498 Pfam Armadillo/beta-catenin-like repeat 369 405 IPR000225 GO:0005515
Aip02g02817 498 Gene3D - 333 475 IPR011989 -
Aip02g02817 498 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 227 - -
Aip02g02817 498 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 226 498 - -
Aip02g02817 498 SMART arm_5 367 407 IPR000225 GO:0005515
Aip02g02817 498 SMART arm_5 329 366 IPR000225 GO:0005515
Aip02g02817 498 SMART arm_5 185 225 IPR000225 GO:0005515
Aip02g02817 498 SMART arm_5 287 326 IPR000225 GO:0005515
Aip02g02817 498 SMART arm_5 244 286 IPR000225 GO:0005515
Aip02g02817 498 SMART arm_5 408 451 IPR000225 GO:0005515
Aip02g02817 498 Gene3D - 153 332 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02817 Aip-Chr2 104175024 104176626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02817 284 451 U-box Gene Family AT2G28830 31.818 3.78e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02817 - - sspl:121809612 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02817 02 104175024 104176626 Aip02g02817 02 104175024 104176626 ECH