Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02790 ATGACCACCACTATTTCAATGTTCATGTCTAGATTAACACAACCCTTAATAAATGTTCCTACTAGCAATGTCCCAAAATTGAATGTGAGGCAAATTCAGAAAGAGAAAGTAGTGTTGATCATGGGAGCAACAGGAGCTGGAAAGTCAAAGCTTTCCGTTGACCTTGCAACATGTTTTCCTTCAGAAATCATCAACTCAGACAAAATCCAAGTGTATGAAGGACTTGACATAGTCACAAACAAAATCTCCAAAGAAGAGCAAAAAGGGGTGCCACATCACTTACTAGGGACACAAAATCCCAACATTGATTTCACATCCTATGATTTTTGTGACATGTCACTAGGTGCCATTGACTCAATCACTAGGAGGGAACAGCTTCCAATCATAGTTGGTGGATCCAATTCATACCTTGAAGCCCTAATTGATGATGATGATTACAAATTCAGATCAAGGTATGATTTTTGTTGCCTATGGGTGGATGTGAAAATGGATGTTCTTGATTCATATGTGCAAAAAAGGGTTGACCAAATGTACCTAAATGGTATGGTCAATGAGCTTAGACCCTTTTTCAATCCCAATAATAAGGACTACTCAATTGGGATTAGAAAAGCAATTGGGGTGCCTGAATTTGATGAGTATTTTAGAAGAGAACATGTTGTTGATGAAGAAACAAAGCAAAGGTTGCTTGATGAAGCAATCAATGAAATCAAGGTCAACACTTGCAACTTGGCTAGGAAACAATTTGGAAAAATCCAAAGGCTAAGGAATGTTAAGAGATGGAAGATTCATAGGTTGGATGCAACACCTGTTTTTCAAAAACATGGACAAGAAGCAAATAAGGCATGGAACAAGTTTGTGTTGGAGCCTAGTGCTATGATTATTGCAAAGTTTTTATATAATAACAACTCATCATCATCATCATCATCATCATCCATCACTTCCAATAATAGAGTTGTTTCTGGATTTAGTAGTAGTGTTCCAGCTTCATCAGAGAGTGTTGTATGTGTGTGA 1011 0.3739 MTTTISMFMSRLTQPLINVPTSNVPKLNVRQIQKEKVVLIMGATGAGKSKLSVDLATCFPSEIINSDKIQVYEGLDIVTNKISKEEQKGVPHHLLGTQNPNIDFTSYDFCDMSLGAIDSITRREQLPIIVGGSNSYLEALIDDDDYKFRSRYDFCCLWVDVKMDVLDSYVQKRVDQMYLNGMVNELRPFFNPNNKDYSIGIRKAIGVPEFDEYFRREHVVDEETKQRLLDEAINEIKVNTCNLARKQFGKIQRLRNVKRWKIHRLDATPVFQKHGQEANKAWNKFVLEPSAMIIAKFLYNNNSSSSSSSSSITSNNRVVSGFSSSVPASSESVVCV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02790 336 Gene3D - 34 298 IPR027417 -
Aip02g02790 336 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 163 262 - -
Aip02g02790 336 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 28 304 IPR039657 -
Aip02g02790 336 Pfam IPP transferase 70 143 - -
Aip02g02790 336 Pfam IPP transferase 148 248 - -
Aip02g02790 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 145 IPR027417 -
Aip02g02790 336 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 28 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02790 Aip-Chr2 103914382 103915715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02790 150 311 C2H2 Transcription Factor Family AT2G27760 31.217 1.75e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02790 K10760 - gmx:100803964 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02790 02 103914382 103915715 Aip02g02790 02 103914382 103915715 ECH
Aip06g00233 06 2459168 2460109 Aip02g02790 02 103914382 103915715 PCT