Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02777 ATGCCGTCTTCTTCTTTAGATGTTCCCCAAATCAAATATGACGTGTTCATCAGTTTTAGAGGAGAAGACATCCGTGATAATTTTCTTAGCCACCTGAGAAAAGAATTGCGTCATAACCAAATTGATTTCTTTGTTGACGATGAAAAGGTTCATCCTGGAGATGAAATTTCATCCACActtcttgaagcaattgaggggtcttacatttcattagtcatcttctcgaaacactatgcttcttcaaaatggtgtatggaggagcttgtgaggataactgaatgtatggaagaatatgaaaggattgtgatacctgttttttacaacgttgatccttctcatgtaagacatcagaaaggaacttttgcagaggcttttgatgttcatgaagagaaatataagatcagtagagaaaagctacaaaattggagatctgtcttgaaaaagattgctaatttatccggAATTCATTATCCATCAAAATATCGTAGGAATGAATCTGAAGTCATTGATGACATTGTCAAGAGTATATCGGAGAAATTGCCGCATCTTTTGTCAAATGCATCCGAAGGCCTTATTGGAATTGATGAAAATTCAAAATTTCTTCAACCTCTACTGGAAATGGAGTCTGATGAAGTTCGAATTGTGGGAATTTGGGGCATGGGAGGCATAGGTAAAACAACAATTGCTAGAGCAATATTTGACAGATATGCCTCTCGATATGAAGGTTGCTGCTTTCTACAAAATGTAAGAGAAGAATCACAAAATTCTGGCAAACACGGCTTATATGAGAAACTTATTTCTGAACTACTTGAGGAAGAACATCTCCTTGTGAAGGGATCAGCCCAAGCAAGATCTATGTATGTTAAGAGAAGGTTGAGTCGGAAAAAGGTCTTCATAGTGCTTGACGATGTGGATACATCAGATATATTAGATTATCTAATTATAAAACAAATCTGTTTGGCACCAGGAAGTAGGGTCATTATAACAACTAGAGACGAGCAAGTACTAATTGCTGCAAGAGTGCATGCAATATACAAGGTCCAAGAATTGAGCTTTAAGAGTTCCCTTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGCTATCCTGAAAATGGATATGAAAAGCTTTCAAAAATGGCCGTTAATTATGCAAATGGCATTCCATTAGCCTTAGAAGTATTGGGATCCTTTTTATGCTCAAGAAGTGTAGTAGCTTGGGAAAGTGCACTAAGAAAACTCAAGATTCATCCTGATCCAAGCATATTCAAAGTGTTGAAATTGAGTTATGATGGATTAGATGAGTTAGAGAGGAGCATATTCTTAGACATTGCTTTCTTTTTCAAAGGAGAATGCATGGATGATGTCATAAGGTTTCTAGATTCTTGTGATTTCTTTGCAGAGATCGGAATAAACAATCTTGAACGTAAAGCTCTTATAACCATTCGGGGCAAAAGAATAGAAATGCATGACTTGATACAACAGATGGGTTGGGAAATAGTTCGTCAAGAATCAAATACAGACCCTGGAAAGTCACCAAAAATAAATAGAGACCCTGGAAAGCTTAGCAGATTAAGTAGACCTGAGGATTTTTACAATTTATTGAAAAATAGCCAAGAAAATAAATTAGTTGAAGGTATTATGATTGACTTGTCTCAAACTAAAGATCTACACTTGAATGCCAACACCTTCAAAAATATGCCCCGCCTAAGATTTCTTAAACTTCATACTCTCTTGGGTGTAAGATCATCGAATGTGCTAGTTCCTACAGGTCTTGAGGCATTTTCTGATGAACTAAGATATTTGGAGTGGTGTAGATATCCTTTGAGTTCCTTGCCGTCAACATTTTTTGCTGAGAAGCTTGTTGAGTTTAGCATGCCACAGAGTCAGGTTTCTAAACTTTGGGATGGAGTGCAGGATCTTGTGAATTTGAAGATAATTAACCTTTCGCAATGCAACCAGTTGGTGGAACTTCCTGATCTTAGTAAGGCAACAAATCTTGAGGTGTTAGACGTGTCCTTTTGTAAAGGGTTGTGTGAACTTCACCCATCTGTTTTATCCATCCCCACACTTAAAAATTTGAGTCTTTCTTGGTGTCAAAAACTGAACAGTGTTAAAGGGGAGATTCATTCCAAGTCTCTTAAAAGACTTGATTTTGGAGGTTGCTCAAGCCTAGAGGAATTTTCGGTGACATCAGGGGAACTGAGTTGTTTATATTTCATTTTCTCAAGAATTAAGAGTCTTCCAAATGAGCTATGCGGCTTTATAACTCTGGAAGAACTTAATCTTGCTTGTTGCAGCGAGCTAATTGAACTCCCTCACAATCTGAAAGCCTTTTCACGATTGAAAAGTTTGACTCTAAATAGTTGCAGTAGTCTTAGATATATACCTGAACTTCCACCATCTATAGAAAAGTTATTTGCTGCTGACTGCACATCATTGGAATCAATATTCAGTTTAAAGGAAGTATTCAGTTTAAATAGGAGACGTATCTCATTTACGAATTGCATGAGATTGGATAAGGAATCACTGAATGATATTATAGAAGATGCCCATCACACAATATTCAGAAATATGTTGTTGTGGTCATCAGCATCATCTTATGGTTCATGGGTTCCTGATGAAGATGACTGGGACAGTCGCTTCAACTGTGATGTTTGTCATGCAGGGAGTAGTGTGCCGGAGTGGTTCAGATGTCAGAGAGCAGAAGGAGCTTCAGTAACAGTTGAAATAGAACAACCTTACTACCAGCTGTTGGGTTTCTGTTTCTGCTGTGTTCTTTCTCAAGAGTTCTCCGACGATCACTCTATCCTTTGTGAATATGACTTAAGAGTACCCGAATATTGA 2844 0.339 MPSSSLDVPQIKYDVFISFRGEDIRDNFLSHLRKELRHNQIDFFVDDEKVHPGDEISSTLLEAIEGSYISLVIFSKHYASSKWCMEELVRITECMEEYERIVIPVFYNVDPSHVRHQKGTFAEAFDVHEEKYKISREKLQNWRSVLKKIANLSGIHYPSKYRRNESEVIDDIVKSISEKLPHLLSNASEGLIGIDENSKFLQPLLEMESDEVRIVGIWGMGGIGKTTIARAIFDRYASRYEGCCFLQNVREESQNSGKHGLYEKLISELLEEEHLLVKGSAQARSMYVKRRLSRKKVFIVLDDVDTSDILDYLIIKQICLAPGSRVIITTRDEQVLIAARVHAIYKVQELSFKSSLELFCLKAFHKSYPENGYEKLSKMAVNYANGIPLALEVLGSFLCSRSVVAWESALRKLKIHPDPSIFKVLKLSYDGLDELERSIFLDIAFFFKGECMDDVIRFLDSCDFFAEIGINNLERKALITIRGKRIEMHDLIQQMGWEIVRQESNTDPGKSPKINRDPGKLSRLSRPEDFYNLLKNSQENKLVEGIMIDLSQTKDLHLNANTFKNMPRLRFLKLHTLLGVRSSNVLVPTGLEAFSDELRYLEWCRYPLSSLPSTFFAEKLVEFSMPQSQVSKLWDGVQDLVNLKIINLSQCNQLVELPDLSKATNLEVLDVSFCKGLCELHPSVLSIPTLKNLSLSWCQKLNSVKGEIHSKSLKRLDFGGCSSLEEFSVTSGELSCLYFIFSRIKSLPNELCGFITLEELNLACCSELIELPHNLKAFSRLKSLTLNSCSSLRYIPELPPSIEKLFAADCTSLESIFSLKEVFSLNRRRISFTNCMRLDKESLNDIIEDAHHTIFRNMLLWSSASSYGSWVPDEDDWDSRFNCDVCHAGSSVPEWFRCQRAEGASVTVEIEQPYYQLLGFCFCCVLSQEFSDDHSILCEYDLRVPEY 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02777 947 MobiDBLite consensus disorder prediction 503 522 - -
Aip02g02777 947 Pfam NB-ARC domain 200 416 IPR002182 GO:0043531
Aip02g02777 947 Gene3D Ribonuclease Inhibitor 532 713 IPR032675 -
Aip02g02777 947 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 938 IPR044974 GO:0006952
Aip02g02777 947 Pfam TIR domain 12 186 IPR000157 GO:0007165
Aip02g02777 947 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Aip02g02777 947 Gene3D - 8 180 IPR035897 -
Aip02g02777 947 PRINTS Disease resistance protein signature 214 229 - -
Aip02g02777 947 PRINTS Disease resistance protein signature 291 305 - -
Aip02g02777 947 PRINTS Disease resistance protein signature 384 398 - -
Aip02g02777 947 PRINTS Disease resistance protein signature 638 654 - -
Aip02g02777 947 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 938 - -
Aip02g02777 947 SUPERFAMILY L domain-like 545 832 - -
Aip02g02777 947 Gene3D - 181 344 IPR027417 -
Aip02g02777 947 Gene3D Ribonuclease Inhibitor 714 851 IPR032675 -
Aip02g02777 947 Pfam Leucine Rich Repeat 619 638 IPR011713 -
Aip02g02777 947 Gene3D - 350 433 IPR042197 -
Aip02g02777 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 443 IPR027417 -
Aip02g02777 947 SUPERFAMILY "Winged helix" DNA-binding domain 421 504 IPR036390 -
Aip02g02777 947 SMART till_3 12 152 IPR000157 GO:0007165
Aip02g02777 947 ProSiteProfiles TIR domain profile. 11 180 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02777 Aip-Chr2 103797922 103803521 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02777 13 797 WRKY Transcription Factor Family AT4G12020 32.327 1.54e-100 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02777 - - aip:107627899 1876.29