Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02773 ATGCCTCGTCTAAGATTTCTTAAGTTTTATGCTCCTTGGTATCGAAGACAGTGCAAAGTCTATGTTCCCACAACCCTGGACCCGTTTCCTGCAAAACTCAGCTATTTGGAGTGGAATAGTTGTCCTCTGAATTCTCTACCATCAAGGTTTTGTGTAGAGAAACTTGTTGAGCTTAGGATGACTAACAGTAAAATTTCTAAACTCTGGGATGGAGCACAGAATCTTGTGAGTTTGACAAACCTTGACCTTGGTGGATGTATAAAGTTGGTAGAGCTCCCAGACTTGAGTAAAGCAACAAAGCTTAAAAGGTTAAACCTAAAGGGTTGTGAAAATCTATGTCAACTTCATCCATCTATTTTATCCATCCAAACACTTGAGGGATTGTATCTTGATGGTTGCAAAAAATTGAAGAGTGTCAAAGGCAACATATATTTGAAGTCTCTTAAAACACTCAGGGTTCGAATGTGCTCAAGGCTGGAGGAATTTTCGGTGTCGTCAGAGAAACTGACGGCTTCGTGTTTCTCTTTGTTAAGAATTAAGAGTCTACCAAATGAATTCTGTTGCTCTATATATCTTCGGTATCTTTTTCTTTTCCAATGTAGAGAGCTAATTGAGCTTCCACACAACATTAAAACCCTATCAAGGTTAGTGACTCTTGACGTAAGAGGTTGTTGTAGTCTTCGATCTATACCGGAGCTTCCACCATCTATTGAAGTGCTTCTTGCTAATGACTGCACATCACTGGAAAGAATATTCAGTTTGAAGGCAGTATTTAGTTTGAACAGAAGACAGATCTCATTTGAAAATTGCGTGAAATTGGAAGAGCAGTCGCTGAATGATATTGGTGAAGATGCCCATCTCACAATATTGAAAAATGTTTTGTTTTTTTTAACAGGTCAATATCAGATGATAAATTATTATGATTATCGTAGAATGGATGGTCGTATTTGTTATCCAGGGTACAAAGTTCCAGAGTGGTTTGTATGTCAGACAACAGAAGCGTCCATAACAATTGAACTTGATCAACCTTACTACCACTTGTTGGGTTTCATCTTCTGTTGTGTTGTTTCTCAAAACATACCGCCTCCTTATTTTAATAAATTGGGTACTCTCAATATTAGGTGTGAATACGGCCACGTCGGAGATGATGTAAAGCACACATTTCTAATTACAAGGCTAAACTTTGTTCCTGAAAGACGACGGAACTCTGAAGATCACGTTTTTATTTGGACTTATCAATTTCCTGAGGAAGACATGTTTAGGGAAATTGAAATGTGTGATGATGATGACAGCACTAGCAACCAAAAGATGTCATTCAGATTCAGTGTTGATAGACCTGAATATGAGAAGAGAGTAGAAGAAAGGAAAAAACAGGTTTTTATCAAAGGGTGTGGGGTTTTGCCAATTTATGCCTCAACTGTCGTGGATGTCATTCAAAAACTTGAATTGGAGTCCAAGTTGCAGTTGAACCCTCATCGTCATAACTCCATCACAAGGCAGAGTATAGACGCACTGAAAAGCAAGATGATCCGGAAGATTAAAGGAAAATCACATCGACTCCTGAAGAAGTAA 1572 0.3836 MPRLRFLKFYAPWYRRQCKVYVPTTLDPFPAKLSYLEWNSCPLNSLPSRFCVEKLVELRMTNSKISKLWDGAQNLVSLTNLDLGGCIKLVELPDLSKATKLKRLNLKGCENLCQLHPSILSIQTLEGLYLDGCKKLKSVKGNIYLKSLKTLRVRMCSRLEEFSVSSEKLTASCFSLLRIKSLPNEFCCSIYLRYLFLFQCRELIELPHNIKTLSRLVTLDVRGCCSLRSIPELPPSIEVLLANDCTSLERIFSLKAVFSLNRRQISFENCVKLEEQSLNDIGEDAHLTILKNVLFFLTGQYQMINYYDYRRMDGRICYPGYKVPEWFVCQTTEASITIELDQPYYHLLGFIFCCVVSQNIPPPYFNKLGTLNIRCEYGHVGDDVKHTFLITRLNFVPERRRNSEDHVFIWTYQFPEEDMFREIEMCDDDDSTSNQKMSFRFSVDRPEYEKRVEERKKQVFIKGCGVLPIYASTVVDVIQKLELESKLQLNPHRHNSITRQSIDALKSKMIRKIKGKSHRLLKK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02773 523 Pfam Leucine Rich Repeat 54 73 IPR011713 -
Aip02g02773 523 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 370 - -
Aip02g02773 523 Pfam C-JID domain 319 473 IPR045344 -
Aip02g02773 523 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 370 IPR044974 GO:0006952
Aip02g02773 523 Gene3D Ribonuclease Inhibitor 1 143 IPR032675 -
Aip02g02773 523 Gene3D Ribonuclease Inhibitor 144 285 IPR032675 -
Aip02g02773 523 SUPERFAMILY L domain-like 17 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02773 Aip-Chr2 103745829 103747500 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02773 1 232 WRKY Transcription Factor Family AT4G12020 34.167 2.27e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02773 - - ahf:112754566 900.968