LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip02g02764	atggaggagcttgtgaagattattgaatgcatggaacagtatgaaaggattgtgatacctgttttttataatgttgatccttctcatgtaaggcatcaaaaaagaacttttgcagaggcttttgatgtccacaaagagagatatgaagaggaaattatgcagagttgGAAATCTGTTATGAAGAAGACGGCAAATTTATCTGGAATTCATTATCCATCCAAATATCGAAATGAATCAGAACTCATCCAAGATATTGTCAAGAATATTTCGGAAAAATTGTCGCATCTTTTTTCAAATGCACCCCAAGACCTTGTCGGAATTGATGAGCATTTTAAATTTCTTCAACCTTTAATGGCAAtggagtctgatgaagttcgaactgtggggatttgggggatgggaggcataggtaaaacaacaattgctagagcaatattcgacagatatgcctctcgatatgaaggttgctgctttctacaaaatgtaagagaagaatcacaaaagtctggtaaacacagcttatatgagaaacttatttctgaactacttgagggagaacatcttgtgaagggatcagcccatgaaagatctatgtatgtcaagagaaagttgagtcggaaaaaggtgctcatagtgcttgatgatgtggatgcattagacaagttagattatctaacaagagaagcaatctgtctgggagcaggtagtagggtcattgtaacaacaagagacgagcaagtactaattgctgcaagagtgcatgcaatatacaaggtccaagaattgagctttaagagttcccttgagcttttttgcttaaaagcctttcacaaaagctatcctgaacatggatatgaagagctttcaaaaatggcagttaattacacaaagggcaatccattagcattaaaagtattgggatcctttctacactcaaggagcataaaagaatggaaaagtgcattgaaaaaactcagggttcatcccaatgtggagatctacaatgtcttaaaattgagttatgatggattagatgattcagataagaacatattccttgacattgcattctttttcagaggagcatacaaggataatgttataaggtttctagactcgtgtgatttctttggcgacattggaataagcactcttgagcgtaaagctcttataactattttcagcgatagaatagaaatgcatgatttgatacaacaaatgggttgggaagtcgttcgccaagaatcaaataaagatcctggaaaACTCACTCGAATAAATAAACCTGAAGATTTCTGCAACTTATTGAAAAATAGTGAGGAAAAAAGTTTAGTAGAAGGCATTATGATAGACTTGTCCCAAATTGGAGATCTACACTTAAATGCGGACACCCTTACAAATATGCCTCGTCTAAGATTTCTTAAGTTTTATGATCCTTCGGATCAAAGACAGTCCAAAGTCTACATTCCCACAACCCTGGACCCGTTTCCTGCAAAACTCAGCTATCTGGAGTGGAATAGTTGTCCTCTGAATTATCTACCATTAAGGTTTTGTGCAGAGAAACTTGTTGAGCTTAGGATGCCTTACAGTCAAACTTCTAAACTCTGGGATGGAGCACAGAATCTTGTGAATTTGACAAGGCTTGAACTTGGTGGATGTAAAAAGTTGGTAGAGCTCCCAGACTTCAGTAAAGCAACAAAGCTTATATCGATAGATCTTTGTAATTGTGAAAAACTATGTCAACTTCATCCATCTATTTTATCCATCCAAACACTTGAGGGATTGTTTCTTGATGGTTGCAAAAAATTGAAGAGTGTCAAAAGCAACATATATTTGAAATCTCTAAAAGTACTCGGGGTTCAAAAGTGCTCAAGCCTGGAGGAATTTTCGGTGTCATCAGAGAAACTGACGACTTCGTATTTCTCTTTGTTGAGAATTAAGAGCTTACCACATGAATTCTATTGCTCTACATATCTTGTGTGTCTTGTTCTTTGGGATTGCAGAGAGCTAATTGAGCTTCCACACCATATCAAAACACTATCAAGCTTATTGACTCTTGACGTAAGTGGCTGTTGTAGTCTTCGATCTATACCGGAGCTTCCACCATCTATTCAAGTGCTTCTTGCTAATGGGTGCACATCACTGGAAAGAATATTCAGTTTGAAGGCAGCATTTAGTTTGAACAGAAGACAGATCTCATTTGAAAATTGCGTGAAATTGGAAGAGGAGTCGCTGAATGATATTACGGAAGATGCCCATCTCACAATATTGAAAAATGTTTTGTTTTCTTTGACAGGTCATTATCCGATGATAAATTATTATCATTATCCTAGAATGGATGGTCGTATTTGTTATCCAGGGTACAAAGTTCCAGAGTGGTTTGGATGTCAGACAACAGAAGCGTCCATAACAATTGAACTTGATCAACCTTACTACCAGTTGTTGGGTTTCATCTTCTGTTGTGTTGTTTCTCAAAACGTACCTCCTCCTTCTTTTAATAAATGGGGTACTCTCAATATCAGGTGTGAATACCGCCACTTCGGAGATGATGTTAAGCACACATTTCTAATTATAAGGCAAATCTTTGTTCCTGGAAGACGACGGAACTCTGAAGATCACGTTTTTATTTGGACTTATCAATTTCCTGATGAAGACATGTTTAGGGAAATTGAAATGTGTGATGATGATGACAGCACTAGCAACCAAAAGATGTCATTCAGATTCAGTGTTGATAGACCTGATGAATATGGGAGAGTAGAAGAAAGGAAAAAACAGGTTTTTATCAAAGGGTGTGGGGTTTTGCCAATGTATGCCTCAACTGTCGTGGATGTCATTCAAAAACTTGAATTGGAGTTCAACTTGCAGTTGAACCCTCATCATCATAACTCCATCACAAGGCAGAGTATGGACGCACTGAAAAGCAAGATGATCCGGATGATTAAAGGAAAATCACATCGACTCCTGAAGAAGTAA	2973	0.2422	MEELVKIIECMEQYERIVIPVFYNVDPSHVRHQKRTFAEAFDVHKERYEEEIMQSWKSVMKKTANLSGIHYPSKYRNESELIQDIVKNISEKLSHLFSNAPQDLVGIDEHFKFLQPLMAMESDEVRTVGIWGMGGIGKTTIARAIFDRYASRYEGCCFLQNVREESQKSGKHSLYEKLISELLEGEHLVKGSAHERSMYVKRKLSRKKVLIVLDDVDALDKLDYLTREAICLGAGSRVIVTTRDEQVLIAARVHAIYKVQELSFKSSLELFCLKAFHKSYPEHGYEELSKMAVNYTKGNPLALKVLGSFLHSRSIKEWKSALKKLRVHPNVEIYNVLKLSYDGLDDSDKNIFLDIAFFFRGAYKDNVIRFLDSCDFFGDIGISTLERKALITIFSDRIEMHDLIQQMGWEVVRQESNKDPGKLTRINKPEDFCNLLKNSEEKSLVEGIMIDLSQIGDLHLNADTLTNMPRLRFLKFYDPSDQRQSKVYIPTTLDPFPAKLSYLEWNSCPLNYLPLRFCAEKLVELRMPYSQTSKLWDGAQNLVNLTRLELGGCKKLVELPDFSKATKLISIDLCNCEKLCQLHPSILSIQTLEGLFLDGCKKLKSVKSNIYLKSLKVLGVQKCSSLEEFSVSSEKLTTSYFSLLRIKSLPHEFYCSTYLVCLVLWDCRELIELPHHIKTLSSLLTLDVSGCCSLRSIPELPPSIQVLLANGCTSLERIFSLKAAFSLNRRQISFENCVKLEEESLNDITEDAHLTILKNVLFSLTGHYPMINYYHYPRMDGRICYPGYKVPEWFGCQTTEASITIELDQPYYQLLGFIFCCVVSQNVPPPSFNKWGTLNIRCEYRHFGDDVKHTFLIIRQIFVPGRRRNSEDHVFIWTYQFPDEDMFREIEMCDDDDSTSNQKMSFRFSVDRPDEYGRVEERKKQVFIKGCGVLPMYASTVVDVIQKLELEFNLQLNPHHHNSITRQSMDALKSKMIRMIKGKSHRLLKK	990

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip02g02764	990	Pfam	TIR domain	2	102	IPR000157	GO:0007165
	Aip02g02764	990	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	2	827	-	-
	Aip02g02764	990	Pfam	NB-ARC domain	116	331	IPR002182	GO:0043531
	Aip02g02764	990	Pfam	C-JID domain	786	939	IPR045344	-
	Aip02g02764	990	SUPERFAMILY	"Winged helix" DNA-binding domain	332	436	IPR036390	-
	Aip02g02764	990	SUPERFAMILY	L domain-like	447	762	-	-
	Aip02g02764	990	Gene3D	Ribonuclease Inhibitor	394	767	IPR032675	-
	Aip02g02764	990	Gene3D	-	262	345	IPR042197	-
	Aip02g02764	990	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	2	827	IPR044974	GO:0006952
	Aip02g02764	990	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	94	355	IPR027417	-
	Aip02g02764	990	PRINTS	Disease resistance protein signature	203	217	-	-
	Aip02g02764	990	PRINTS	Disease resistance protein signature	127	142	-	-
	Aip02g02764	990	PRINTS	Disease resistance protein signature	296	310	-	-
	Aip02g02764	990	PRINTS	Disease resistance protein signature	678	694	-	-
	Aip02g02764	990	Gene3D	-	94	256	IPR027417	-
	Aip02g02764	990	Pfam	Leucine Rich Repeat	521	540	IPR011713	-
	Aip02g02764	990	Gene3D	-	1	93	IPR035897	-
	Aip02g02764	990	SUPERFAMILY	Toll/Interleukin receptor TIR domain	1	68	IPR035897	-
	Aip02g02764	990	ProSiteProfiles	TIR domain profile.	1	93	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip02g02764	Aip-Chr2	103573063	103581502	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip02g02764	4	699	WRKY Transcription Factor Family	AT4G12020	32.482	2.41e-96	333

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip02g02764	-		-	ahf:112754566	1236.48