Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02752 ATGGCTTCCGAACCTTCCAGAAACATTGATCTCACGCTTGGAGAGCCCAAGGGGCCCAAGGAGGAGCCCGACACCGAGGACGCCTCGCCGTCAACGTCTCCGCCATCGGCCATACGCGTCATGCCGGTGGCAGTGCACATGCCATCCATGAACAAGGCCTTAGTCCAAGCCCAAGCCCAGGCCCATCCAACTCAAAAGAGAGCCTCCACGAAGGACAGGCACACCAAGGTGGAGGGACGCGGCAGGAGAATCCGAATGCCTGCCACGTGTGCGGCCCGGATCTTCCAGCTCACCCGGGAGCTCGGCCACAAGTCCGACGGAGAAACCATCCGGTCACTATCAGGATCCGACCCGGAACCGGGAGACCCGCCCTGCAAGAAGAAGCGCAAAAGACCCGCCAATAGCGCCTACGTGGATGTTAACGAAAGCGCTGTTTCAGTCTCCGCAGGCCTGACGGTTACAACAAATTCCGTAACTAACACCCTAACAAACTCCACAACCTCCTCCGCCACTCACATAACAAACTCTGTAACGGCCGCTATAATACCGCAGCAAACCGCTATTGCCTTACCGCAAAACGCGGTACCTGCCATGTGGACGGCGATTCCGTCCAACGCTTTCTTCGTCGTGCCTTCCGTGGCGGCGGCGGGGCCTTCCAACGCGCCGCAATTCTTCACATTCGCACGTCCGATTTCGGCGTTTGTTTCGTCGGTGATGACGCCGGTTCAAATTCAACCGGCCGGTTCGACTGCTCCGTCGTCGAAATCTCCGCCAAGAGCGACGGTTATGGCGCCGAGCAGTGCAACTACGACAACGCACACGCTGAGGGATTTCTCACTGGAGATTTACGATAAGCAGGAGCTTCAGTTCATGTCGAAGTCGAGTTCAAAGCATTGA 897 0.5764 MASEPSRNIDLTLGEPKGPKEEPDTEDASPSTSPPSAIRVMPVAVHMPSMNKALVQAQAQAHPTQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRSLSGSDPEPGDPPCKKKRKRPANSAYVDVNESAVSVSAGLTVTTNSVTNTLTNSTTSSATHITNSVTAAIIPQQTAIALPQNAVPAMWTAIPSNAFFVVPSVAAAGPSNAPQFFTFARPISAFVSSVMTPVQIQPAGSTAPSSKSPPRATVMAPSSATTTTHTLRDFSLEIYDKQELQFMSKSSSKH 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02752 298 PANTHER TRANSCRIPTION FACTOR TCP9 116 296 - -
Aip02g02752 298 PANTHER TRANSCRIPTION FACTOR TCP9 20 113 - -
Aip02g02752 298 MobiDBLite consensus disorder prediction 1 36 - -
Aip02g02752 298 MobiDBLite consensus disorder prediction 55 80 - -
Aip02g02752 298 MobiDBLite consensus disorder prediction 102 134 - -
Aip02g02752 298 MobiDBLite consensus disorder prediction 245 269 - -
Aip02g02752 298 Pfam TCP family transcription factor 69 112 IPR017887 -
Aip02g02752 298 ProSiteProfiles TCP domain profile. 70 124 IPR017887 -
Aip02g02752 298 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 113 IPR005333 GO:0003700
Aip02g02752 298 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 116 296 IPR005333 GO:0003700
Aip02g02752 298 MobiDBLite consensus disorder prediction 66 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02752 Aip-Chr2 103469816 103471298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02752 47 297 TCP Transcription Factor Family AT2G45680 42.342 1.02e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip02g02752 TCP 5.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02752 - - aip:107626029 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02752 02 103469816 103471298 Aip02g02752 02 103469816 103471298 ECH