Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02747 ATGAAAAATATCAACAAAACTATTGAACGATACCAACGCTGCTCTTTTACTCCTCAAGATGAACATGTTGAATGTGAAACTCAGAGCTGGTACCAGGAGGTATCAAAGCTAAAGGCAAAGTATGAGTCTCTACAAAGGACTCAGAGGCACTTGCTTGGGGAAGATCTTGGACCATTGAGCATAAAGGAGCTGCAGAATCTTGAGAAACAGCTTGAAGGTGCTTTAGCACAGGCCAGGCAGAGGAAGACACAAATTATGATTGAACAAATGGAAGAGCTACGTAGGAGGGAGCGCCATCTTGGAGATATGAACAAGCAACTTAGGCTCAAGCTTGAGGCAGAAGGGTTCAATCTAAAAGCTATGGAAAGCTTGTGGAGTTCAACTTCAGCTGCTGCAAACAGCAACTTTACCTTTCAGCCTTCTCAAACCAATAACCCTATGGATTGCCAACCTGAGCCTTTCTTGCAAATAGGGTACCATCACTATGTTCAACCTGAAGCATCTAATAATGTTGCTAAGAACATGGGTTGTGAGACCAATAACTTCATGCATGGATGGGTGCTTTGA 567 0.4303 MKNINKTIERYQRCSFTPQDEHVECETQSWYQEVSKLKAKYESLQRTQRHLLGEDLGPLSIKELQNLEKQLEGALAQARQRKTQIMIEQMEELRRRERHLGDMNKQLRLKLEAEGFNLKAMESLWSSTSAAANSNFTFQPSQTNNPMDCQPEPFLQIGYHHYVQPEASNNVAKNMGCETNNFMHGWVL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02747 188 Coils Coil 61 84 - -
Aip02g02747 188 Coils Coil 90 110 - -
Aip02g02747 188 PANTHER TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A-LIKE ISOFORM X1 3 166 - -
Aip02g02747 188 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 166 - -
Aip02g02747 188 ProSiteProfiles K-box domain profile. 27 117 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aip02g02747 188 Pfam K-box region 26 111 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02747 Aip-Chr2 103379887 103384196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02747 4 188 MADS-box Gene Family AT2G45650 53.886 5.74e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02747 K09264 - gmx:100810549 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02747 02 103379887 103384196 Aip02g02747 02 103379887 103384196 ECH