Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02722 ATGCCCTCCCGTCCACCACCACTGCCACAACAACAACAACCACTCTCCACGGCGGCGCCACCCCTCCAACACAACCACCACCACCACAACCAAAGAATCATTCTCATCGGATCCCTCTCCCTCACCATCCTCCTCCTCCTCTCTCTCCTCTTCACCCTCCTCACCTTCCTCTACCGGAAACTCTCCCTCCACCGCACCACCCCCTTTCCCCACCACCACCACCACCACAACAACCACCGCCGCTACTCCTACACGCTCCTCCGCCGCGCGACAAACTCCTTCTCCCCGTCCACCAAACTCGGCCACGGCGGCTTCGGCTCCGTCCACAGAGCCACCCTCCCTTCCGGCGAAACCGTGGCACTGAAGCTCATGGACTCGCCGGGCTCCCTCCAAGGCGAACGCGAGTTCCACAACGAACTCTCTCTCTGTTCGAATCTCAACTCACCTTTCATTCTCTCTCTCTTGGGTTTCTCTTCCGACAGAAGAAACCGCAAACTCATACTCGTCTATGAGCTAATGAAGAATCGAAGCCTCCAAGACGCGCTTTTGGATCGCAAGTGTCCCGAGCTTATGAACTGGAAAACCCGATTCGACGTTGTAGTTTCGGTGGCCAAAGGGTTGGAGTACTTACACCATTGTTGTGACCCTCCGGTGATTCACGGTGACATCAAGCCGAGTAATATTTTGCTGGATTCTGAGTTTAGGGCTAAAATTGGGGATTTTGGGCTTGCCAGGGTGAAGGAGGAGGTTGGGGTTGTGGTGGTGGAGGAGGAAGTTCACGGTGGTGATTGTGGTGGGGGCGGCGGTGGTGATGAAGAGTGCGATCGTGGTTCGGTGGTGGAGAGTGTGGCGACTGGGACTACTGCTGGATTTGATTTGGAGAGGTCGCCGGAGAGTTTTGCGGCGGGGAGGGTTTTGGATTCAGATGCGTCTCCGGCGGCGGCGGGGACTTCGCCGGAGGTGGGGTTGGAGAAAGGTAGCGTCTTGTCGGATGGGTTGTTTGATGGGGTGAGTGTGGAGAGTGGGAATCAGAGGAGGAAGGGTGGCGGTAATGGCGGTGGTTCCGGCAGGGATTGGTGGTGGAAACAGGACAATGGTGGAGGGTCAGAGTCAGGGAGGGTTAAGGATTATGTTATGGAATGGATTGGTAGTGAGATAAAGAAAGAAAGGCCCAAGAATGAATGGGTTGCTTCTCCAAGTAGCACAGGTTGTGATGCAGAGAATAATGGTGGTGTTGAAGGATTGGATTCGGAGGCCAAAAACAAGAATAAGAACAAGAAGAAAAAGCAGAGAAAGAGGTTGGATTGGTGGGCTTCATTGGATGAGGAGAAGGTGAAGAATCAGCCGCAGCAGAAGAAGGAGAAGAATCGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTCTGTGAGGAGCTGGCGAAGAAGAGCAAGAAGAAGAAGAGGAGCCTTGATAACAATGGTGGTGAAGCTTGGTGGCAGAACAAAGATGAGGACTTGGTGGTGGTTCAGGATCAGAAGAGGAAGAGGAAAAACAAGACCAGCAGAGGGAGCATTGATTGGTGGCTTGATGGTTTGAGTGGTGAACTAATCCGAAACAACAATGGCAGAAGGAATAGCCAAGATTGGGTGAGTGGTGACATACCGAAGAGTGGTGGAATCAGCAGCACTCCAAGCATGAGGGGGACTGTGTGTTATATTGCTCCTGAATATGGTGGTGGTGGCCAATTATCTGAGAAATGTGATGTATATAGTTTTGGTGTTCTTCTTTTGGTTTTGGTTGCTGGGAGGAGACCCCTTCAAGTGACAGCATCGCCGATCTCGGAATTCGAGAGGGCTAATTTGATTTCATGGGCTAGGCAACTTGCTCACAATGGCAGGCTATTGGATCTTGTTGACACTAACATTCTTTCATTGGACAAGGAACAAGCTTTGCTCTGCATCACAATTGCCTTGTTGTGCCTCCAGAGATCGCCTGCGAAGAGGCCGTCCATGAAGGAGATTGTGGGGATGCTCTCCGGCGAGGCTGACACGCCTCACTTGCCATTCGAGTTCTCGCCGTCGCCGCCCTCAAATTTTCTCTTCAAGTCCAGGAAGAAGGCTCGGTGA 2103 0.5283 MPSRPPPLPQQQQPLSTAAPPLQHNHHHHNQRIILIGSLSLTILLLLSLLFTLLTFLYRKLSLHRTTPFPHHHHHHNNHRRYSYTLLRRATNSFSPSTKLGHGGFGSVHRATLPSGETVALKLMDSPGSLQGEREFHNELSLCSNLNSPFILSLLGFSSDRRNRKLILVYELMKNRSLQDALLDRKCPELMNWKTRFDVVVSVAKGLEYLHHCCDPPVIHGDIKPSNILLDSEFRAKIGDFGLARVKEEVGVVVVEEEVHGGDCGGGGGGDEECDRGSVVESVATGTTAGFDLERSPESFAAGRVLDSDASPAAAGTSPEVGLEKGSVLSDGLFDGVSVESGNQRRKGGGNGGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKNEWVASPSSTGCDAENNGGVEGLDSEAKNKNKNKKKKQRKRLDWWASLDEEKVKNQPQQKKEKNRKPREWWKEEFCEELAKKSKKKKRSLDNNGGEAWWQNKDEDLVVVQDQKRKRKNKTSRGSIDWWLDGLSGELIRNNNGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTNILSLDKEQALLCITIALLCLQRSPAKRPSMKEIVGMLSGEADTPHLPFEFSPSPPSNFLFKSRKKAR 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02722 700 Pfam Protein kinase domain 555 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02722 700 Pfam Protein kinase domain 97 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02722 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Aip02g02722 700 ProSiteProfiles Protein kinase domain profile. 94 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02722 700 Coils Coil 412 432 - -
Aip02g02722 700 SMART serkin_6 94 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02722 700 Gene3D Transferase(Phosphotransferase) domain 1 532 678 - -
Aip02g02722 700 Gene3D Transferase(Phosphotransferase) domain 1 173 289 - -
Aip02g02722 700 ProSitePatterns Protein kinases ATP-binding region signature. 100 122 IPR017441 GO:0005524
Aip02g02722 700 PANTHER OS07G0586332 PROTEIN 1 700 - -
Aip02g02722 700 Gene3D Phosphorylase Kinase; domain 1 67 172 - -
Aip02g02722 700 MobiDBLite consensus disorder prediction 388 433 - -
Aip02g02722 700 MobiDBLite consensus disorder prediction 680 700 - -
Aip02g02722 700 SUPERFAMILY Protein kinase-like (PK-like) 69 688 IPR011009 -
Aip02g02722 700 MobiDBLite consensus disorder prediction 334 372 - -
Aip02g02722 700 PANTHER OS07G0586332 PROTEIN 1 700 IPR044576 -
Aip02g02722 700 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02722 Aip-Chr2 102880098 102882904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02722 528 670 Receptor kinase-like Gene Family AT3G58690 34.228 1.36e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Aip02g02722 Pkinase 2.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02722 - - aip:107626015 1237.63