Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02671 ATGGACCCAGTTGCAGCACAAGGAAGACCTCTACCGCCTCCTTTTCTTACCAGAGACCTTCATCTACACCCTCACCATCAATTTCAACCACACCATAATCTCAACAACACCAACACCAACCAAACCACCGATTTGAATGACCAAAGCCGTGGCCAAAAGCGTGACCGTGCCGATGACCAGAACCCCGCCACCCCTCCTTCTACTGGAGACGGCAAGGATCCGCACTCCGGCGGAGGAGAATCCGGCGAGATCTCCAGGAGACCCAGGGGGAGACCAGCAGGCTCCAAGAACAAGCCTAAGCCACCCATCATCATCACAAGGGACAGTGCAAATGCTTTAAGATCTCATGTCATGGAAGTTGCAAACGGTTGTGACATCATGGAGAGTGTCACCGTCTTCGCGCGGCGGCGCCAACGCGGTGTCTGTATCCTCAGCGGCAGTGGAACGGTTACCAACGTCACTCTCCGGCAGCCGGCTTCGCCGGGTGCCGTAGTAACCCTACATGGTAGGTTTGAGATTCTGTCCCTGTCCGGATCATTCCTGCCGCCGCCGGCCCCGCCTGCAGCGTCAGGACTAGCCATATATCTGGCTGGTGGACAGGGACAGGTAGTAGGTGGGAGTGTGGTGGGCCCACTTTTGGCGGCCGGCCCGGTGGTGATCATGGCAGCCTCGTTCGGCAATGCAGCGTACGAGAGACTGCCACTAGAAGAGGAGGAGGGGTCCGTCCCCGTCTCTGGAAGCGGAGGCGGAGGACTAGGATCCCCTGGAATTGTAGGACAACAGCCACAGCCACAACCGCAACCGCAACAACTAGTGGGAGGAGATCCCAATAGTTCATCAATGTTTCATGGTGGAGTGCCTCAAAATCTTCTTAATTCATGCCAATTGCCAGCTGAAGGTTTCTGGGGTGGTTCCGGTGCACGTCCTCCCTTTTAA 936 0.5652 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQPHHNLNNTNTNQTTDLNDQSRGQKRDRADDQNPATPPSTGDGKDPHSGGGESGEISRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEVANGCDIMESVTVFARRRQRGVCILSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLLAAGPVVIMAASFGNAAYERLPLEEEEGSVPVSGSGGGGLGSPGIVGQQPQPQPQPQQLVGGDPNSSSMFHGGVPQNLLNSCQLPAEGFWGGSGARPPF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02671 311 MobiDBLite consensus disorder prediction 1 104 - -
Aip02g02671 311 MobiDBLite consensus disorder prediction 29 47 - -
Aip02g02671 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 4 311 - -
Aip02g02671 311 MobiDBLite consensus disorder prediction 239 288 - -
Aip02g02671 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 311 IPR014476 GO:0003680
Aip02g02671 311 MobiDBLite consensus disorder prediction 258 288 - -
Aip02g02671 311 Pfam Plants and Prokaryotes Conserved (PCC) domain 114 226 IPR005175 -
Aip02g02671 311 ProSiteProfiles PPC domain profile profile. 110 247 IPR005175 -
Aip02g02671 311 CDD DUF296 114 181 IPR005175 -
Aip02g02671 311 MobiDBLite consensus disorder prediction 76 90 - -
Aip02g02671 311 Gene3D - 113 241 - -
Aip02g02671 311 SUPERFAMILY AF0104/ALDC/Ptd012-like 110 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02671 Aip-Chr2 102197320 102199154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02671 1 311 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 63.110 2.45e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02671 - - gmx:100816243 378.252