Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02668 ATGAGTATGAACACTAGTTGTAGCGGAAGCAGCCCTAGTGGTGGTGGTGGTGGTGGAAGCAGTAGTGGTGGTGGCAGCAGCGGTGGCGGTGGCCCTTGTGGGGCTTGCAAATTCTTAAGGAGAAAGTGTGTACCCGGGTGTATATTTGCACCCTACTTTGATTCGGAGCAAGGTGCCACACATTTTGCGGCGGTTCACAAGGTTTTTGGTGCTAGCAATGTTTCAAAGCTTCTCATGAATATTCCAGTTCATAAAAGACTTGATGCTGTTGTCACTATTTGTTATGAAGCTCAAGCAAGACTTAGAGACCCTGTCTATGGCTGCGTTGCTCATATCTTTGCTCTTCAACAACAGATAGTGAATTTACAAGCAGAACTTTCATATTTACAAGGTTATCTTGCAACCCTTGAGTTACCTCATCCGCCACAACCACCTCCTACTCCACCGCAACCAACCCTAGCCCCTCCAACTCTCTCAATTACTGACCTCCCACCTCCACCACCTACTCCTGCCAGCACGGCTACCGTGCCGGCCACGTATGATTTGTCTTCACTCTTTGAACCTATGGCCCAAACTTCTTGGGCCATGCACAATAGGCCCATTGACGCACCACGCCAATTTTTTAGTAGTGGCACATCATCTTTACAGTCTAGTGGTGGCGGCCGCGATGGTGGCGATCTTCAAACACTGGCTCATGAACTTTTGCGTAGACATGGAGTTGATCCTACTACTCCTGTGGCATGTTCTAGTGCCCCCTCATCATCACAATCTCATTCAAAATGA 783 0.484 MSMNTSCSGSSPSGGGGGGSSSGGGSSGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLMNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQIVNLQAELSYLQGYLATLELPHPPQPPPTPPQPTLAPPTLSITDLPPPPPTPASTATVPATYDLSSLFEPMAQTSWAMHNRPIDAPRQFFSSGTSSLQSSGGGRDGGDLQTLAHELLRRHGVDPTTPVACSSAPSSSQSHSK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02668 260 MobiDBLite consensus disorder prediction 1 24 - -
Aip02g02668 260 PANTHER LOB DOMAIN CONTAINING PROTEIN 3 239 - -
Aip02g02668 260 MobiDBLite consensus disorder prediction 139 173 - -
Aip02g02668 260 MobiDBLite consensus disorder prediction 246 260 - -
Aip02g02668 260 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 3 239 - -
Aip02g02668 260 MobiDBLite consensus disorder prediction 205 223 - -
Aip02g02668 260 MobiDBLite consensus disorder prediction 205 260 - -
Aip02g02668 260 ProSiteProfiles LOB domain profile. 31 133 IPR004883 -
Aip02g02668 260 MobiDBLite consensus disorder prediction 139 176 - -
Aip02g02668 260 Pfam Lateral organ boundaries (LOB) domain 32 130 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02668 Aip-Chr2 102117628 102122810 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02668 34 257 AS2 family AT2G45420 60.606 1.46e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip02g02668 LOB 1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02668 K21994 - qsu:112017957 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02557 04 112899386 112916759 Aip02g02668 02 102117628 102122810 PCT