Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02667 ATGGATTGTGATGAAAATAATCAACAAAGAGGTGGGCCTTGTGGAGCTTGCAAGTTCTTGAGAAGGAAGTGTGTGAAGGGATGCATATTTGCACCATACTTTGACTCAGACCAAGGAACTTCACACTTTGCTGCGGTGCATAAGGTTTTTGGTGCAAGCAATGCATCTAAGCTTCTCATGAGGATCCCTCCTCATAAGAGGCTTGATGCTGTTCTCACTCTTTCTTATGAGGCTCTTTCTAGGGTTAGAGACCCTGTTTATGGTTGTGTTGCTCATATCTTTGCTCTTCAACAACAGGTTGTGAACTTGCAAGCAGAATTAACATATGTTCAGGCCCGTCTTGCTACAATGCATCGCATCCCTATAGCTGCTGCTGCTGCTTCACCACCAACTCTTCATTCATCATCATCCTTAGATCACTTGGCATCATCAAATGCTGACTTGCAAAATGCCTCTAACAACATGTCCATGAACTTTGATCCTCCTCCTCAACCACCACCACACTCAACAACATTAGAATCAAGCAGCTTCATCAACTCATCAGATGAACCACCACCACCACTACTACTCGAGGATGGGGATCTTCAAACTTTGGCAAGAGAATTTGTCTCTAGGTACTTGCCCGGAGTAAGATTCCAGCCATCTAATAATTCTCACTAA 660 0.4379 MDCDENNQQRGGPCGACKFLRRKCVKGCIFAPYFDSDQGTSHFAAVHKVFGASNASKLLMRIPPHKRLDAVLTLSYEALSRVRDPVYGCVAHIFALQQQVVNLQAELTYVQARLATMHRIPIAAAAASPPTLHSSSSLDHLASSNADLQNASNNMSMNFDPPPQPPPHSTTLESSSFINSSDEPPPPLLLEDGDLQTLAREFVSRYLPGVRFQPSNNSH 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02667 219 Pfam Lateral organ boundaries (LOB) domain 13 111 IPR004883 -
Aip02g02667 219 MobiDBLite consensus disorder prediction 150 194 - -
Aip02g02667 219 ProSiteProfiles LOB domain profile. 12 114 IPR004883 -
Aip02g02667 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 7 209 - -
Aip02g02667 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 7 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02667 Aip-Chr2 102082327 102087367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02667 11 216 AS2 family AT4G00210 52.995 3.93e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip02g02667 LOB 5.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02667 - - adu:107475721 380.563