Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02664 ATGTGTACAATATATAGACAGCAGCAGTCTATCCTCACCCTCTCCCTTCCTCGTAGCAGCACTTCCTCTCCATCGGTCTTTACGCATAGCAGCACGCACCAGCAGTCGCTTTTCGTTCTCCTCTCCATCTGGACAAAGAAGAAGAAGAACCCAGTTCCTCCAGCAAAGAATTCTTTTAACGGCACCGTCGGCTCCGTCGCCGCTGCAGCGCACGACATCGCTTTTGTCGTTTACTTACATTTCTTTGCCAACATCATCCAAGAGGGTGTTGAAGCCTTAGCAGAAGATGTTCCAGTAAAGTCTGTACCTTCCAGGCATTCATCAAAGAGGAGCAGAGCAGCAGAAGTTCATAATTTATCAGAAAAGAGAAGAAGTGGGATCAATGAAAAAATGAAGGCCTTGCAACATCTAATTCCGAATTCTATCAAGGGCTGA 435 0.4644 MCTIYRQQQSILTLSLPRSSTSSPSVFTHSSTHQQSLFVLLSIWTKKKKNPVPPAKNSFNGTVGSVAAAAHDIAFVVYLHFFANIIQEGVEALAEDVPVKSVPSRHSSKRSRAAEVHNLSEKRRSGINEKMKALQHLIPNSIKG 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02664 144 MobiDBLite consensus disorder prediction 100 120 - -
Aip02g02664 144 Gene3D - 106 143 IPR036638 GO:0046983
Aip02g02664 144 PANTHER TRANSCRIPTION FACTOR SPATULA 82 143 - -
Aip02g02664 144 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 82 143 IPR031066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02664 Aip-Chr2 102033496 102034978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02664 88 143 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 59.322 1.39e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02664 - - var:108334706 89.3521