Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02663 ATGGAAGCTAGAGAAGGCATTAGTTCCGGGGTTACGGTGATAGGGGCAGAAGCTCCATCAGCATATCATGTGGCACCAAGGAGTGAAGCTCCAAACCAGGTTCATGTGCCTGAGGGAGGCACGGCAGCTGTGGCTGCGGCTGCGGCTGCTGCTGCCGCAGCCGGGGTTTCTCCGGTGAGTGTGGGGATAGATGGATCGACGGTTAAGAAGAAACGGGGTAGACCGAGGAAATATGGGCCGGATGGATCTGTCACTATGGCATTGTCACCATTGCCACTCTCATCTTCAGGTCCACATTCAAATGACTTTTCATCCGGTAAACGGGGGAAATCGAAGGGGGCGGAGTACAAGCAGTCGAAAAAACTTGGGTTTGATCAACTAGGTGAATATAATGCATGTGCTGATGGTACAAACTTTCTGCCACATATCATCACTGTTAATGCTGGAGAGGACATTACCATGAAGGTTATATCGTTTTCTCAGCAAGGACCGCGAGCTATATGCATCTTATCTGCTAGTGGTGTAATTTCGAATGTCACTCTTCGTCAACCTGATTCTTCTGGCGGCACTTTGACCTATGAGGGCCGTTTCGATATACTTTCTTTGTCGGGATCGTTCATGCCTACTGACAACCAAGGAACACGAAGCAGGACGGGTGGAATGAGTGTCTCGTTGGCAAGCCCTGATGGTCGTGTTGTAGGTGGTGGTGTTGCCGGACTTCTAGTAGCCGCTAGTCCGGTGCAGGTGGTGGTGGGAAGTTTCCTGCCAAGCAACCAACAAGATCAGAAACCAAAGAAGCTGAAGCCAACCGATTATTCCACGCCCGTTGTTACTCCGGCAGTCATCTCGATGTCTTCCGCACCAAGTCACCCGAGCAATACTGAGAAAGATGATCATGTGATGGGTGGTGCACACCATGTGATGCAAAACTCATCATCAAACCTTACCCCTTCTCCCTTCAGAAGAGAAAATTGGGTGAACATGCACTCCATGCAACAAGACTCAAGAAAGTCGGCTACCGACATCAACATATCTTTGCCAGATAGTTAA 1050 0.4971 MEAREGISSGVTVIGAEAPSAYHVAPRSEAPNQVHVPEGGTAAVAAAAAAAAAAGVSPVSVGIDGSTVKKKRGRPRKYGPDGSVTMALSPLPLSSSGPHSNDFSSGKRGKSKGAEYKQSKKLGFDQLGEYNACADGTNFLPHIITVNAGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFDILSLSGSFMPTDNQGTRSRTGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLPSNQQDQKPKKLKPTDYSTPVVTPAVISMSSAPSHPSNTEKDDHVMGGAHHVMQNSSSNLTPSPFRRENWVNMHSMQQDSRKSATDINISLPDS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02663 349 MobiDBLite consensus disorder prediction 88 104 - -
Aip02g02663 349 Gene3D - 141 270 - -
Aip02g02663 349 MobiDBLite consensus disorder prediction 63 115 - -
Aip02g02663 349 SUPERFAMILY AF0104/ALDC/Ptd012-like 139 257 - -
Aip02g02663 349 ProSiteProfiles PPC domain profile profile. 136 278 IPR005175 -
Aip02g02663 349 MobiDBLite consensus disorder prediction 329 349 - -
Aip02g02663 349 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 348 IPR039605 GO:0003680
Aip02g02663 349 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 348 - -
Aip02g02663 349 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 254 IPR005175 -
Aip02g02663 349 CDD DUF296 141 231 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02663 Aip-Chr2 102023057 102027661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02663 10 346 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 52.909 1.31e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02663 - - gmx:100793726 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02554 04 112746331 112750072 Aip02g02663 02 102023057 102027661 PCT