Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02630 ATGGCCATATCATTCACTTGCATTGTTTTGATATTAGTTGGCAGCATCACCACCAATGCTGGAACTCACAAATCCAAATTGTTACCCTTAGATCAAGAAGCCAATGCTCTGCTTTCAATCAGTGAATTGTGGGGTATCCAATATAATAATGTCTCAAACCGTTGCCACTGGCCCGGAATCAAGTGTAACAAAGCTGGAAGCATAACAACCCTTTCACCTCCAACTCCAAGGAATTACAGCTCTGACTTCTTCCCACAACTATGCAATATGCAACTAAAATTTTCAGTTTTTCCAAATCTAGTCCGTCTAGATTTCAGTGAAATGGGGTTATGTGAGGCTCCTTTAACATTATTGACAAATCTAACTCAACTTGTGGTGTTGGACATTTCCAATAACCAATACATTAGTGGTCCAATTCCACAAGAACTAAGCAAACTGGAGAGACTTGTCACGTTGGACTTGAGTGCCAACGCGCTCAGCGAAGGCATTCCATTGATCTTGGGTCAAATGAGCAGTCTCACACACATGAAACTTTCCAATAATCTCCTGTATGGGGATCTTCCTTTCACACTGGCAAATCTAACTCAACTTCTTGTGTTGGACCTCTCCCAAAACAAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACGTTAGACCTGAGTTCAAATTCCCTGTCTGGTCCAATTCCTGAGCAAATTGGGTACTTGAACCGTTTGACAAGTCTCCACCTTCATTCAAATTTGCTTAGTGGCTCTATACCTTCAAATATAGGACTTTTGACCCGTTTGGAAGTGCTCACCATTGGGTCCAACATGATAGACGGTTGTATCCCCAAAGAAATAGAGCATTGGTTGCATCTAAAAGTTTTAGATCTCTCTTATAATGCTATTTCTGGTGTTATCCCATCTTCTATCTTTATTCACTCTACTTATGTGGACCTCAGCAATAACAATTTAAGTGGAAGCATTCCTTCCCAAATTGGAAACCTTTCGTATTTAGACCTAAGTTTCAATAACCTTAGTATCAAAAACAGAAAGGAACTTGAGTCTATTCCAGTGTGCTATCTGCATTGCAATCTCTGCCATGATCCACAAGATCAATTAGAAGATCATCATAATAAGCATTCTGGTCGATCATTAATTTTGGTCATAATCGTGGTCTGCATTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCATGCCAGGCATCATGGCAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCAATTTGGAACTATGATGGCAAAATCGCATTTGAGGATATCATTGAAGCAACAGAGGACTTTGATATCAGATATTGCATTGGAACCGGCGCTTATGGTAGCGTCTATAAAGCGCAACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATGCATCATTTTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCACCACCGCAACATCATTAGGCTTTATGGCTATTGTTTGCATAACAGATGCATGTTTTTGGTGTACGAATACTTAGAAAGAGGAAGCTTGTACTGTAACTTGGCGGACGAGATCGAAGCACAAGAGTTGAAGTGGAGCAAGAGGGTGAACATCATCAAAGGGACAGCTTATGCTCTTGCTCACATGCATCATCACTGCCCTTCTCCTATTGTTCATCGAGATGTCAGCAGCAACAATGTTCTGCTGAATTCAGACTTAGAAGCTTGTGTCTCAGATTTCGGCACAGTAAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTAGTTGGCACTTATGGATATGTTGCTCCAGAATTGGCATACACCATGAGTGTGACTACAAAATGTGA 1899 0.4018 MAISFTCIVLILVGSITTNAGTHKSKLLPLDQEANALLSISELWGIQYNNVSNRCHWPGIKCNKAGSITTLSPPTPRNYSSDFFPQLCNMQLKFSVFPNLVRLDFSEMGLCEAPLTLLTNLTQLVVLDISNNQYISGPIPQELSKLERLVTLDLSANALSEGIPLILGQMSSLTHMKLSNNLLYGDLPFTLANLTQLLVLDLSQNKLSGFIPHEIGKLTNLLTLDLSSNSLSGPIPEQIGYLNRLTSLHLHSNLLSGSIPSNIGLLTRLEVLTIGSNMIDGCIPKEIEHWLHLKVLDLSYNAISGVIPSSIFIHSTYVDLSNNNLSGSIPSQIGNLSYLDLSFNNLSIKNRKELESIPVCYLHCNLCHDPQDQLEDHHNKHSGRSLILVIIVVCITISLGSVGIGICIFHARHHGKLENKATKNGDLFSIWNYDGKIAFEDIIEATEDFDIRYCIGTGAYGSVYKAQLPSGKTVALKKLHKTESENASFYKSFCNEVEVLTEIHHRNIIRLYGYCLHNRCMFLVYEYLERGSLYCNLADEIEAQELKWSKRVNIIKGTAYALAHMHHHCPSPIVHRDVSSNNVLLNSDLEACVSDFGTVRLLDPDSSNQTLSWHLWICCSRIGIHHECDYKM 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02630 632 SMART LRR_typ_2 290 314 IPR003591 -
Aip02g02630 632 SMART LRR_typ_2 194 218 IPR003591 -
Aip02g02630 632 SMART LRR_typ_2 242 266 IPR003591 -
Aip02g02630 632 SMART LRR_typ_2 146 170 IPR003591 -
Aip02g02630 632 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 35 250 - -
Aip02g02630 632 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 232 611 - -
Aip02g02630 632 PRINTS Leucine-rich repeat signature 197 210 - -
Aip02g02630 632 PRINTS Leucine-rich repeat signature 218 231 - -
Aip02g02630 632 Pfam Protein kinase domain 454 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02630 632 SUPERFAMILY Protein kinase-like (PK-like) 430 610 IPR011009 -
Aip02g02630 632 Gene3D Transferase(Phosphotransferase) domain 1 528 620 - -
Aip02g02630 632 ProSiteProfiles Protein kinase domain profile. 449 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02630 632 Gene3D Ribonuclease Inhibitor 289 357 IPR032675 -
Aip02g02630 632 SUPERFAMILY L domain-like 97 346 - -
Aip02g02630 632 Pfam Leucine rich repeat 172 231 IPR001611 GO:0005515
Aip02g02630 632 ProSitePatterns Protein kinases ATP-binding region signature. 455 477 IPR017441 GO:0005524
Aip02g02630 632 ProSitePatterns Tyrosine protein kinases specific active-site signature. 573 585 IPR008266 GO:0004672|GO:0006468
Aip02g02630 632 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 35 250 - -
Aip02g02630 632 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 232 611 - -
Aip02g02630 632 Gene3D Ribonuclease Inhibitor 28 185 IPR032675 -
Aip02g02630 632 Gene3D Ribonuclease Inhibitor 186 288 IPR032675 -
Aip02g02630 632 Gene3D Phosphorylase Kinase; domain 1 411 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02630 Aip-Chr2 101224737 101226786 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02630 131 608 Receptor kinase-like Gene Family AT4G08850 38.740 5.14e-104 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip02g02630 Pkinase 9.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02630 - - ahf:112728727 930.628