Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02628 ATGTTAGTGCCACTTCTCTTTGTTGGCATCACCACCAATGCTGGAACTCACAAATTGTCACCCTTGGATCAAGAAGCCAATGCTATGCTTTCAATTAGTAAAGAGTTGTGGAGTAACCAACATAATAATGTCTCAAACCGTTGCAACTGGCCCGGAGTCAACTGCAACAAAGCTGGAAGTATAACATTGCTTTCACCTCCAACTCCAAGTAATTTCACCGACGAGTTCAGGACACAACTCTGCTCTTTGAAACTAAACTTTTCAGTGTTTCAAAATCTAGTCCATCTAGATCTCAGTGAAATGGGGTTATGTGAGTTCCCCAAACTAAGGGGTCTCAAGAAGCTACAACATCTCAACCTATCATACAACTATTTAGGAGGTGAGGTTCCTTTTACATTATTGGAAAATCTAACTCAACTTCTTGTGTTGGACTTGAGTGCCAACAGCTTCCGTGGAAGCATTCCATTGATTTTTGGTCAAATGAGCAGTCTCACACACATGAACCTTTCCAACAATCTACTATTTGGTGAGGTTCCTTTCACATTGCCAAATCTAACTCAACTTCTTGTGTTGGACCTTTCCCAAAACGAACTTAGTGGCTTCATTCCTCATGAAATAGGGAAATTGACAAATTTATTAACCTTAGACCTCAGTTCAAATTCCCTGTCTGGTCCAATTCCTGAGCAAATTGGGTACTTGAACCGTTTGACAAGTCTCCACCTTCATTCAAATTTGCTTAGTGGTTTCATTCCTCATGAAATAGGGAAATTAACAAATTTATTAACCTTAGACCTGAGTTCAAATTTCTTGTCTGGTCCAATTCCTGAGCAAATAGGGAACTTGAGTCTGTTATTCCACTGTTATCTGGATTACAATCCCTTTCTTGACAACGAATATTATGACTGCGATGATCATTTAAACGACCATCATAATAAGCATTTTGGCCGATCACTGGTTTTGGTCATAATCGTGGTCTGCGTTACCATTTCATTGGGTTCTGTTGGGATTGGAATATGCATTTTCCGTGCCAGGCATCATGGCAAGCTTGAAAATAAGGCCACAAAAAATGGAGACTTGTTCTCAATTTGGAACTATGATGGCAAAATTGCATTTGAGGACATCATTCAAGCCACAGAGGACTTTGATATCAGATATTGCATTGGAACCGGTGCTTATGGTAGCGTCTACGAAGCGCGACTTCCAAGTGGCAAAACTGTTGCATTGAAGAAGCTTCACAAAACAGAATCAGAAAATCCATCCTATTACAAGAGCTTCTGCAATGAAGTTGAGGTCTTGACAGAGATTCGCCACTGCAACATCATTAAGCTTTATGGCTATTGTTTGCATAACCGATGCATGTTTTTGGTGTATGAATACTTGGAAAGAGGAAGCTTGTTCTGTAACTTGGCCAACGAGATCGAAGCACAAGAGTTGAATTGGAGCAAGAGGGTGAATATCATCAAAGGGACAGCTTATGCTCTTGCTCACATGCATCATCACTGCCCTTCTCCTATTGTTCATCGAGATGTCAGCAGCAACAATGTTCTGCTGAATTCAGAGTTAGAAGCTTGTGTCTCAGATTTCGGCACAGCGAGACTTCTTGATCCTGATTCATCTAACCAAACTCTTTTAGTTGGCACTTATGGATATATTGCTCCAGAATTGGCATACACCATGAGTGTGACTACAAAATGTGATGTTTATAGTTTCGGAGTGGTGGCATTAGAAACAATGATGGGTCATCACCCAGGAGAATTCATGTCCACTATGTCAAAGCCATCTACTCAACAATTATTGGTGAAAGATGTGTTGGATCCGCGGATTCCACTTCCGAAATCTCGGAAAGATATGCAAGATGTTGTGCATGTTGTAAAGCTAGCATTAGCATGCCTCTCCTCTGACCCAAAATCCAGACCATCAATGCAGGATGTGGCTAATGAGCTTTCAGCTTCCAAGGCTTCCACGAATTTGTCTTTTTATGATGTCTCAATCTACCAACTGATGCAATATCAAGTACATGTCATATGA 2028 0.4073 MLVPLLFVGITTNAGTHKLSPLDQEANAMLSISKELWSNQHNNVSNRCNWPGVNCNKAGSITLLSPPTPSNFTDEFRTQLCSLKLNFSVFQNLVHLDLSEMGLCEFPKLRGLKKLQHLNLSYNYLGGEVPFTLLENLTQLLVLDLSANSFRGSIPLIFGQMSSLTHMNLSNNLLFGEVPFTLPNLTQLLVLDLSQNELSGFIPHEIGKLTNLLTLDLSSNSLSGPIPEQIGYLNRLTSLHLHSNLLSGFIPHEIGKLTNLLTLDLSSNFLSGPIPEQIGNLSLLFHCYLDYNPFLDNEYYDCDDHLNDHHNKHFGRSLVLVIIVVCVTISLGSVGIGICIFRARHHGKLENKATKNGDLFSIWNYDGKIAFEDIIQATEDFDIRYCIGTGAYGSVYEARLPSGKTVALKKLHKTESENPSYYKSFCNEVEVLTEIRHCNIIKLYGYCLHNRCMFLVYEYLERGSLFCNLANEIEAQELNWSKRVNIIKGTAYALAHMHHHCPSPIVHRDVSSNNVLLNSELEACVSDFGTARLLDPDSSNQTLLVGTYGYIAPELAYTMSVTTKCDVYSFGVVALETMMGHHPGEFMSTMSKPSTQQLLVKDVLDPRIPLPKSRKDMQDVVHVVKLALACLSSDPKSRPSMQDVANELSASKASTNLSFYDVSIYQLMQYQVHVI 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02628 675 SUPERFAMILY Protein kinase-like (PK-like) 362 648 IPR011009 -
Aip02g02628 675 SMART LRR_sd22_2 112 139 - -
Aip02g02628 675 SMART LRR_sd22_2 209 235 - -
Aip02g02628 675 SMART LRR_sd22_2 257 283 - -
Aip02g02628 675 Pfam Protein kinase domain 386 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02628 675 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 108 671 - -
Aip02g02628 675 Pfam Leucine Rich Repeat 114 143 IPR001611 GO:0005515
Aip02g02628 675 SUPERFAMILY L domain-like 27 297 - -
Aip02g02628 675 Gene3D Ribonuclease Inhibitor 22 309 IPR032675 -
Aip02g02628 675 ProSiteProfiles Protein kinase domain profile. 381 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02628 675 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 23 292 - -
Aip02g02628 675 ProSitePatterns Tyrosine protein kinases specific active-site signature. 505 517 IPR008266 GO:0004672|GO:0006468
Aip02g02628 675 SMART LRR_typ_2 112 136 IPR003591 -
Aip02g02628 675 SMART LRR_typ_2 185 208 IPR003591 -
Aip02g02628 675 SMART LRR_typ_2 209 233 IPR003591 -
Aip02g02628 675 SMART LRR_typ_2 137 160 IPR003591 -
Aip02g02628 675 SMART LRR_typ_2 257 281 IPR003591 -
Aip02g02628 675 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Aip02g02628 675 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 23 292 - -
Aip02g02628 675 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 108 671 - -
Aip02g02628 675 Gene3D Transferase(Phosphotransferase) domain 1 460 665 - -
Aip02g02628 675 PRINTS Leucine-rich repeat signature 209 222 - -
Aip02g02628 675 PRINTS Leucine-rich repeat signature 188 201 - -
Aip02g02628 675 Gene3D Phosphorylase Kinase; domain 1 343 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02628 Aip-Chr2 101211182 101213616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02628 71 553 Receptor kinase-like Gene Family AT4G08850 40.161 2.60e-99 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip02g02628 Pkinase 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02628 - - ahf:112730549 1110.9