Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02623 ATGTCTTCTTTGGACCTCTCATCAAATAAATTGAGTGGCTCACTACCATCAAGTATTACCAAAGCCATACGCCTCTCATACATAGACCTCTCTCACAACCACTTGAAAGGTCCTATACCAACTCTTTTCCCTTCTTGTGCTCTTAATGCAACAATAGATTTAAACCACAACATGTTAAATGGAAGCATTACTTTCAAAATTGGTTGTGCTACCAATGTTGACCTTAGCCATAATTTTTTCAGTGGTGAGCTTCCATCTATTCATGGATTAGCTTCAAAGCTAGAGAATTTGGATCTTAGTTACAATAATTTTACAGGAAAATTAAACAAGGAACTTGCTGCTCTAAGGTTCATTAACCTTTCATATAATTCCTTTGACTTTTCACAAGATCATCATGACAAGCTCCTAGATTATTGTTCTTTCCAAAAAGACTCATTGATTGGATGTGGCTCTCTAAATTTGTCATCATGCCACTCTGTCCAACAAAGAAAGTCACCATCATCAAATAAAGCAAAGCACACAATTGTAATTGCTCTTTCCATCATTGGATTCATTCTCTTACTATTTCTTGCCACCTTGTGTTTTACCAAACATGTGGCTAAAACAAAAGTTGAAGGAGTTTCTACAAAGAATGGAGACTTGTTCTCTATATGTAACTGTGATGGGAAAATTGCATTTGAGGACATAATTGAAGCAACACAAGACTTTGATAATAGATACTGCATTGGAACTGGTGCATATGGTAGTGTTTACCAAGCAAATTTGCCAAGTGGTAGAACTGTTGCATTGAAGAAACTTCATCAAAAGGAATCTCAGAACCCTTCATTTGACAAGAGTTTCCGCAATGAGTTTCTGATGTTATCGCGAATCCGGCATAGAAACATTGTCAAGCTTTATGGTTATTGTCTTCACAACAGGTAG 921 0.3648 MSSLDLSSNKLSGSLPSSITKAIRLSYIDLSHNHLKGPIPTLFPSCALNATIDLNHNMLNGSITFKIGCATNVDLSHNFFSGELPSIHGLASKLENLDLSYNNFTGKLNKELAALRFINLSYNSFDFSQDHHDKLLDYCSFQKDSLIGCGSLNLSSCHSVQQRKSPSSNKAKHTIVIALSIIGFILLLFLATLCFTKHVAKTKVEGVSTKNGDLFSICNCDGKIAFEDIIEATQDFDNRYCIGTGAYGSVYQANLPSGRTVALKKLHQKESQNPSFDKSFRNEFLMLSRIRHRNIVKLYGYCLHNR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02623 306 SUPERFAMILY L domain-like 3 128 - -
Aip02g02623 306 Pfam Protein kinase domain 241 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02623 306 ProSiteProfiles Protein kinase domain profile. 236 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02623 306 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 306 - -
Aip02g02623 306 Gene3D Phosphorylase Kinase; domain 1 196 306 - -
Aip02g02623 306 SUPERFAMILY Protein kinase-like (PK-like) 224 306 IPR011009 -
Aip02g02623 306 ProSitePatterns Protein kinases ATP-binding region signature. 242 264 IPR017441 GO:0005524
Aip02g02623 306 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 1 306 - -
Aip02g02623 306 Pfam Leucine Rich Repeat 93 113 IPR001611 GO:0005515
Aip02g02623 306 Gene3D Ribonuclease Inhibitor 72 131 IPR032675 -
Aip02g02623 306 Gene3D Ribonuclease Inhibitor 1 71 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02623 Aip-Chr2 101134549 101135469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02623 1 306 Receptor kinase-like Gene Family AT4G08850 34.545 1.64e-45 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip02g02623 Pkinase 4.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02623 - - aip:107627808 488.804