Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02614 ATGGTGGCAAAGTGTAGTAACTGTGCTTTACTTATTATAGCAGAGGTGCTTTTGTTTTCTACCACCTGCTCTTATAGGATATTTCCACCAAATGCACCCAACCTCACCACCGTGGAGCCGCCTTCGTCTTCCTTCAATAATTCGGAAAGACAGGCATTGATTCAGAGTGGTTGGTGGGGTAGTCATCACGCCAATGACCCAAACCATTGCTATTGGCCGGGCGTCAGCTGCGACGATGCTGGAAGTGTTGTAGGGATTTACGGATGGGAATTGAATTACAAATCCAAATTATTGCGGCTACAGGCCTTGAACTTCACGGCCTTCCCCAATTTGGATTCTCTGGATCTTGATGGAATGGGACTTATCGGAAGCATCCCCAAAGAAATTGGAACTGGCGCTTATGGCAGTGTGTACAAAGCCCAACTTCCAAGTGGCAAAATTGTTGCATTGAAGAAACTTCACCAAAGAGAGTCACAAAATCCATCTTTTGACAAGAGCTTCCGCAACGAGATTAAGATGTTATCACAAATTCGTCATAGAAACATTGTCAAGCTTCATGGATTTTGTCTCCACAATCGGTGCATGTTTTTGGTATACGAATACATGGAACGAGGAAGCTTATTTTATGCCTTAAGCATGGATGATGATGAGGCTAAGGAGCTAAGTTGGAGCAAAAGGGTGAATATCATTAGTGGAACAGCTAATGCTTTGGCTTACATGCATCATGACTGTTTCCCACCGATAGTTCATAGAGATGTAACAAGCAACAACATTTTGTTGAACTCAGAGTTGCATGCTGTTGTCTCGGACTTCGGAACCGCTAGACTTCTTGATCCTGATTCTTCAAATCAAACATTACAAGTTGGAACATATGGATACCTTGTACCAGAATTGGCATATACATTGAGTGTAACAGAAAAATGTGATGTATATAGTTTTGGAGTGGTGGCATTGGAAACAATAATGGGAAGACATCCAGGAGATCTTATCTTGTCTTTGTTCAACTCTTCTAACAAAAACATAATGGTAAAAGATCTCTTGGATTCACGCATCAGTTTACCATTATGTCAAAAGGATGCTCAAGCTATAGTTCAAGTGGTAACATTGGCATTGACATGCTTGCGCTCTAATCCAAAATCAAGACCATCAATGCAGCAAGTGGCTCATGAACTTTCTAATTTCAAACAATCATCACTGTCTTTGCCTTTGTCTGAAATCACAGTCCATCAACTGATAGCTTAG 1242 0.4138 MVAKCSNCALLIIAEVLLFSTTCSYRIFPPNAPNLTTVEPPSSSFNNSERQALIQSGWWGSHHANDPNHCYWPGVSCDDAGSVVGIYGWELNYKSKLLRLQALNFTAFPNLDSLDLDGMGLIGSIPKEIGTGAYGSVYKAQLPSGKIVALKKLHQRESQNPSFDKSFRNEIKMLSQIRHRNIVKLHGFCLHNRCMFLVYEYMERGSLFYALSMDDDEAKELSWSKRVNIISGTANALAYMHHDCFPPIVHRDVTSNNILLNSELHAVVSDFGTARLLDPDSSNQTLQVGTYGYLVPELAYTLSVTEKCDVYSFGVVALETIMGRHPGDLILSLFNSSNKNIMVKDLLDSRISLPLCQKDAQAIVQVVTLALTCLRSNPKSRPSMQQVAHELSNFKQSSLSLPLSEITVHQLIA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02614 413 Pfam Protein kinase domain 127 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02614 413 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 51 131 - -
Aip02g02614 413 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 129 411 - -
Aip02g02614 413 ProSitePatterns Tyrosine protein kinases specific active-site signature. 248 260 IPR008266 GO:0004672|GO:0006468
Aip02g02614 413 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 129 411 - -
Aip02g02614 413 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 51 131 - -
Aip02g02614 413 ProSitePatterns Protein kinases ATP-binding region signature. 129 151 IPR017441 GO:0005524
Aip02g02614 413 ProSiteProfiles Protein kinase domain profile. 123 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02614 413 SUPERFAMILY Protein kinase-like (PK-like) 126 391 IPR011009 -
Aip02g02614 413 Gene3D Transferase(Phosphotransferase) domain 1 203 403 - -
Aip02g02614 413 Gene3D Phosphorylase Kinase; domain 1 129 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02614 Aip-Chr2 100964826 100974738 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02614 129 296 Receptor kinase-like Gene Family AT4G08850 58.480 2.44e-59 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip02g02614 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02614 - - gmx:102667972 427.557